Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq7991 205 1e-47 seq12282 102 1e-16 >seq7991 Length=9451 Score = 205 bits (226), Expect = 1e-47 Identities = 1146/1812 (63%), Gaps = 43/1812 (2%) Strand=Plus/Plus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 ||||||| |||||| || |||| | |||||||||||||| || |||||||| | Sbjct 1176 TGAACTGGATGGGTGCGGCAGCTGCCTGAGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 1235 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTC-CATG 113683 | |||||||| | | ||||| || | |||| | | ||| || | |||| Sbjct 1236 CGAGCTTCCAGCCCGCGAAGTGCATACTGGTGATCTTGCCCATGGATGG-CTCCCGCATG 1294 Query 113684 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATC 113743 || ||||| | || || || || || ||| ||||| || || | ||| | | Sbjct 1295 TGGATGTTCAGAGACTGAGACTGGTCAATAAAGGCACCACGGTCAGCAGACATCTG---C 1351 Query 113744 ACATCCTTCATCTT---GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 113800 ||| || ||| ||| ||||| || || |||| ||| ||| |||||| | ||| Sbjct 1352 ACAATGGTCCTCTGAGAGATCTCCCAGACGGTCTTGTAAAGGGCCTTGATATCAGCCGGG 1411 Query 113801 ATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTT 113860 || || | |||||||| ||| || | || || | | |||||| ||| Sbjct 1412 ATGCTGGGAATGCTCTGGATGGAACCATCCTCGGCGATAATACGGTTCTTCATGGCCTCA 1471 Query 113861 GACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCA 113920 ||||| | |||| || | | |||||| | || | ||||| || ||||| Sbjct 1472 GACCACAAGCCAAGCTCTGTCAGATCCCTGAGAAGCCACGGGTTGACGACCTGGAACTCG 1531 Query 113921 CCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTA 113980 || ||||| |||| | | ||||| |||| ||||||||||| ||||||||||||||| Sbjct 1532 CCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCGAAGCACTCATTGTTA 1591 Query 113981 CCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGA 114040 |||| ||| || | || || || |||||||| ||||||| | | ||||| || | | Sbjct 1592 CCCAGGATCTGCGACGTCGAAGCAGTGGGCATTGGTGCCAGCAACAAACTGTTGCGTACA 1651 Query 114041 CCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCC 114100 || | ||| | || |||||||| || |||||||| | | | || | Sbjct 1652 CCAGTCTCCTTGATCTTGTCCTTGAGCGCATCCCAGTCCCAAAGGTCGGAAGGCTTGACA 1711 Query 114101 TGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTAT 114160 | |||||| |||||||| ||||| || || ||| |||| ||||| |||||| |||| Sbjct 1712 TTCCACATGTCAAACTGCAGGATGCCCTGTGAGACTGGGCTGCCCTCGTATGTCTTGTAT 1771 Query 114161 GGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCA 114220 |||||||| |||| || | || || ||| || || || || || ||||| Sbjct 1772 GGGCCCTCCACCTTGGCAATATCACTTGATGCAGTGAGAGCAGCATGGTAGATGGTCTCG 1831 Query 114221 AAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATC-AAACGC--GAGTCGGCACAAA 114277 || || | ||| | | ||||| || || ||| || | | || ||| Sbjct 1832 AAGATCTGCTTATTTAGCTCGCGAGCCTCTGGAGAGTCGAAAGGCATGCGAAGGGCCAA- 1890 Query 114278 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 114337 ||| | || || ||||| || ||||||| ||||| || || |||| ||| || | Sbjct 1891 --GAATGCGTCAGCAAGACCCTGAACACCGACACCAATAGGCCGGTGTCGCATGTT--GC 1946 Query 114338 TTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTG 114394 | | | || |||| || ||||| ||| ||| || | | | || || || | Sbjct 1947 TGT-TATAGGCCTCCTTGACCGGATAGTGATTGACATCAATGATCTTGTTCAGGTTGCGG 2005 Query 114395 GTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTG 114454 || |||| || | || || | || | | | | | | | | || | | Sbjct 2006 ACGATGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAGCAGTTGTTGTCGTAGTCA 2065 Query 114455 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 114514 || || ||| || || || || |||| || ||||| | | ||| ||| || | Sbjct 2066 ACGTATGCAGGTAGAGCAATGGAGGCCAAGTTGCACACGGCGACCTCGTCCGGTGCACAG 2125 Query 114515 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 114574 ||||| || || || || || | || || || |||||| |||| |||||| || || Sbjct 2126 TACTCGATGATCTCTGTGCAGAGGTTGGAGCTTCGAATGGTACCCAGGTTCTTCTGGTTG 2185 Query 114575 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGAC 114634 ||| ||| ||||| || |||||| | || | || ||||| || || | Sbjct 2186 CTCTTGCGGTTTGCGTGGTCCTTATACAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCT 2245 Query 114635 TTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTG---GCTCGCCCCTC 114690 | ||||||||| | ||| | | || | ||| || ||| ||| |||| ||||| Sbjct 2246 TCGAGAATAGCATACCACAGCTTCTG-GGCCTTCA---TGGTCTTGCGACCTCGGCCCTC 2301 Query 114691 CTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGG 114750 || |||||||| |||||| || || ||||| || || | || | ||| || || Sbjct 2302 CTTCTCGTACTGCTCGTAGAGAGCCTCGAACTCATCGCCGTAGCAGTCGGCGAGGCCAGG 2361 Query 114751 TGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAG 114810 || | || || | || | ||| | ||| || ||| || ||||||||||| || Sbjct 2362 ACACTCGTTAGGACACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAAAAG 2421 Query 114811 GTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATT 114870 || ||||||||||| || ||| ||||| || || || || | || || || Sbjct 2422 ATCGGGGATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTGCCGTGGTT 2481 Query 114871 GAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGAT 114930 |||| || | || || | || ||| |||||||| || || ||||| | || | Sbjct 2482 CTTGCGCAGGTCAAGGAACTCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAA 2541 Query 114931 TGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCG 114987 | || ||| | || |||| | || || | || ||| || || || || Sbjct 2542 AGCACCAGGACGCTTATTGCCGCCCTGATCGACGTATCGGGCGGTGTTGTTGAAGACCCG 2601 Query 114988 AAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTG 115045 |||||||| |||| |||| |||| ||| || || || ||| || ||| | || Sbjct 2602 CAGCATTGGTGTGATGCCATTAGATGTGCCGTTAGTGCCAGCGATGTATGAGCC--GGTG 2659 Query 115046 GCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCAC 115105 || | || || | || || ||| ||||| || ||| ||| ||||| || || Sbjct 2660 GCACGGATGCGGTGCACGTTCAGACCGATACCACCCGCCATCTTGGAGATCATAGCACAA 2719 Query 115106 TCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAG 115165 | |||| || |||| || || ||||| ||| |||| | ||| ||||||||| Sbjct 2720 GTCTTGAGGGTGTCGTAAATGCCCTCGATGCTGTCCTCCTTCATGTCGACAAGGAAGCAT 2779 Query 115166 CTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAAC 115225 |||| || ||| || || ||||| ||||| | || || | || || |||| Sbjct 2780 GATGACAACTGGGGCTGAGGCGTGCCAGCATTGAACAAAGTGGGCGAGGCATGTGTGAAG 2839 Query 115226 ATACCT-TGGGACATCTTATCGTAGGTCTCCAAGAC---GGCGGGAATGTCTTCCCCGTG 115281 | || | | |||||| | ||||||||| | ||| || | |||| ||| | Sbjct 2840 A-ACTTATTTGACATCAGGTTGTAGGTCTCGATGACCCTCTCGACATCGTCTCCCCAG-- 2896 Query 115282 AATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAG 115341 ||||||| | ||| ||||| | ||||| ||| ||| || | | |||||||||| Sbjct 2897 -ATACCGACAGCGACACGCATGATCATGTGTTGTGGTCGCTCAACAACTTTACCATCGAG 2955 Query 115342 CCTCTGGAGGTA 115353 | | ||||||| Sbjct 2956 CTTGAGGAGGTA 2967 >seq12282 Length=8984 Score = 102 bits (112), Expect = 1e-16 Identities = 151/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| |||||||| ||||| || || || || || |||||| ||| || ||||||||||| Sbjct 7760 GTGCAGACCCTCATCACGAGAAATTAGCTCGTTGGAGAAGGTCAGGCCAGGCATGAGACC 7701 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||| | ||||||||| | |||| || ||||||||| |||||||| Sbjct 7700 GCGCTTCTTGAGCCAGAAAATGGAGGCGAATGCGCCGCTGAAGAAGATGCCCTCCACGGC 7641 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAACCACTTCAT 126234 ||||| |||| || |||| ||| ||| | |||| ||| | |||||||| Sbjct 7640 AGCGAAGGCAACCAGTCGCTGGGCATAGGTG---GACTCGCGGTCCTGGATCCACTTCAG 7584 Query 126235 CGCCCACTGCGCCTTTTTCTCGATACACGGGAC 126267 ||||| | ||||| || ||| || ||||| Sbjct 7583 AGCCCAGTCGGCCTTCTTGCGGATGCAGGGGAC 7551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597253677676560