Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10]
13,382 sequences; 46,487,794 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq7991 269 3e-67
>seq7991
Length=9451
Score = 269 bits (298), Expect = 3e-67
Identities = 1090/1680 (65%), Gaps = 64/1680 (4%)
Strand=Plus/Minus
Query 93717 TTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAG 93776
|||| | ||||| | |||||| || || ||| ||||||||||||||| | ||||| |
Sbjct 3004 TTACCAATACTTCGGCTTCAAGACCCTCGAGCGCTCGTACCTCCTCAAGCTCGATGGTAA 2945
Query 93777 GGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGA 93836
||| |||||||| || || || | ||||| ||||| |||| || || ||||
Sbjct 2944 AGTTGTTGAGCGACCACAACACATGATCATGCGTGTCGCTGTCGGTATCTGGGGAGACGA 2885
Query 93837 CATGCCGA-ATGTTTTGCGGG-CTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893
|| ||| | | | || | | | || ||| | ||| | || |||| |
Sbjct 2884 --TGTCGAGAGGGTCATCGAGACCTACAACCTGATGTCAAATAAGTTCTTCACACATG-C 2828
Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953
| | || || ||||||| || || || || ||| ||| |||| || || ||||| |
Sbjct 2827 CTCGCCCACTTTGTTCAATGCTGGCACGCCTCAGCCCCAGTTGTCATCATGCTTCCTTGT 2768
Query 93954 -GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012
||| | |||| ||| |||| || |||| ||||| ||||||| ||||| | |
Sbjct 2767 CGAC-ATGAAGGAGGACAGCATCGAGGGCATTTACGACACCCTCAAGACTTGTGCTATGA 2709
Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072
|||| || ||||| || ||||| | | || ||| | | ||||||| || || |
Sbjct 2708 TCTCCAAGATGGCGGGTGGTATCGGTCTGAACGTGCACCGCATCCGTGCCACCGGCTCAT 2649
Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132
||||| || || || ||||| || || ||| || || ||||| |||||||||||||
Sbjct 2648 ACATCGCTGGCACTAACGGCACATCTAATGGCATCACACCAATGCTGCGGGTCTTCAACA 2589
Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192
|| | || || ||||| || ||||| || | | | ||| |||| || |||| |
Sbjct 2588 ACACCGCCCGATACGTCGATCAGGGCGGCAATAAGCGTCCTGGTGCTTTTGCTATCTACC 2529
Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252
| ||||| |||||||| || || | ||| | |||||||| |||||||||||||| |
Sbjct 2528 TTGAGCCATGGCACGCTGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGG 2469
Query 94253 ATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309
| ||||| | ||| | || || ||| || |||||| | || || ||||| ||||
Sbjct 2468 A---GGAGATCCGAGCCCGTGATCTTTTCCTTGCCCTCTGGATCCCCGATCTTTTCATGA 2412
Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT 94369
| || |||||||| ||| | ||||| || | ||||| || || ||||| || ||
Sbjct 2411 AGCGGGTCGAGAAGAACGGTGACTGGACCCTGATGTGTCCTAACGAGTGTCCTGGCCTCG 2352
Query 94370 CCGAC--GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CA 94426
||||| | | ||| | | || || | | || | | ||||| | |||| |
Sbjct 2351 CCGACTGCTACGGCGAT-GAG-TTCGAGGCTCTCTACGAGCAGTACGAGAAGGAGGGCCG 2294
Query 94427 AGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGG 94486
||| | | ||| ||| | || |||||||||| || || | || | ||| |
Sbjct 2293 AGGTC-GCAAGACCATGAAGGCCCAGAAGCTGTGGTATGCTATTCTCGAAGCTCAGACCG 2235
Query 94487 AGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGC 94546
|||| || | |||| ||| ||| |||||| | ||| |||| ||||||| ||
Sbjct 2234 AGACTGGCAACCCCTTCATGCTGTATAAGGACCACGCAAACCGCAAGAGCAACCAGAAGA 2175
Query 94547 ACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGG 94606
|||| || || ||||| || || ||||| ||||| ||||||| | | ||||
Sbjct 2174 ACCTGGGTACCATTCGAAGCTCCAACCTCTGCACAGAGATCATCGAGTACTGTGCACCGG 2115
Query 94607 ACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTG-TCCACTTTCGTGCGAGATGCC 94665
||||| | || ||||| ||| ||| |||||| || || || | | | | | || |
Sbjct 2114 ACGAGGTCGCCGTGTGCAACTTGGCCTCCAT-----TGCTCTACCTGCATAC--GTTGAC 2062
Query 94666 TAC-ACGTCTACTGCTTC--GTTCGATC---TGGAGGAGCTTGTGAACTTCGCGGGAAGG 94719
||| || | |||||| | ||| | | || | ||| || || | ||
Sbjct 2061 TACGACAACAACTGCTACAACTTCCAGCAGTTGCACGAGGTT----AC--CCAGG---TC 2011
Query 94720 ATGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAG 94779
|| ||| |||||||||| | | || || || ||| || ||| |||||| |
Sbjct 2010 ATCGTCCGCAACCTGAACAAGATCATTGATGTCAATCACTATCCGGTCAAGGAGGCCTAT 1951
Query 94780 AACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTG 94839
||| ||| || || ||||| || || |||| || |||||| | || ||||| |
Sbjct 1950 AACAGCAACATGCGACACCGGCCTATTGGTGTCGGTGTTCAGGGTCTTGCTGACGCATTC 1891
Query 94840 GTGATGATGCGTCTGCCCTACGACTCTGTCGACGC-GGCGGGTTTGAATTTGAACATATT 94898
|| | || |||| | ||||||| || || ||| | | ||| | | || ||
Sbjct 1890 TTGGCCCTTCGCATGCCTTTCGACTCTCCAGAGGCTCGCGAG-CTAAATAAGCAGATCTT 1832
Query 94899 CGAAAGCATTTATTACGGGGC---CA-TGAAACAATCCGTCCACTTGGCCAGATCGGACG 94954
||| | ||| || | | || || || | ||| || ||| | || | ||| |
Sbjct 1831 CGAGACCATCTACCATGCTGCTCTCACTGCATCAA---GTGATATTGCCAAGGT-GGAGG 1776
Query 94955 GCGGGCCACACGAATCGTTCCGCGGATCGCCC-TTGGAACAGGGCATTTTTCAGTTCGAC 95013
|| ||| || || | || || |||| | ||||||||| | ||||| |||
Sbjct 1775 GC---CCATAC-AAGACATACGAGGGCAGCCCAGTCTCACAGGGCATCCTGCAGTTTGAC 1720
Query 95014 CTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATC 95073
| ||| ||| ||||| || | || | |||||||| || || | || |||
Sbjct 1719 ATGTGGAATGTCAAGCCTTCCGACCTTTGGGACTGGGATGCGCT---CAAGGACAAGATC 1663
Query 95074 AA--ACAC-GGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCG 95130
|| | || ||||| ||| || | |||| || |||||||| || || ||| ||
Sbjct 1662 AAGGAGACTGGTGTACGCAACAGTTTGTTGCTGGCACCAATGCCCACTGCTTCGACGTCG 1603
Query 95131 CAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGG 95190
|||||||| || ||||| |||| ||||| || | |||||||||| | ||| | | ||
Sbjct 1602 CAGATCCTGGGTAACAATGAGTGCTTCGAGCCATACACCTCCAACATCTACCAGCGACGT 1543
Query 95191 GTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTG 95250
|||||||| || || |||| ||| ||||| | || || |||| ||||| ||
Sbjct 1542 GTGCTCGCTGGCGAGTTCCAGGTCGTCAACCCGTGGCTTCTCAGGGATCTGACAGAGCTT 1483
Query 95251 GGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAAC 95310
|| ||||| ||| | ||||||| | | || | || ||| |||||| |
Sbjct 1482 GGCTTGTGGTCTGAGGCCATGAAGAACCGTATTATCGCCGAGGATGGTTCCATCCAGAGC 1423
Query 95311 ATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAG 95370
|| || || |||| || |||||||| || ||||||||||| ||||||||| | |||
Sbjct 1422 ATTCCCAGCATCCCGGCTGATATCAAGGCCCTTTACAAGACCGTCTGGGAGATCTCTCAG 1363
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494640445176720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |