Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq7991 269 3e-67 >seq7991 Length=9451 Score = 269 bits (298), Expect = 3e-67 Identities = 1090/1680 (65%), Gaps = 64/1680 (4%) Strand=Plus/Minus Query 93717 TTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAG 93776 |||| | ||||| | |||||| || || ||| ||||||||||||||| | ||||| | Sbjct 3004 TTACCAATACTTCGGCTTCAAGACCCTCGAGCGCTCGTACCTCCTCAAGCTCGATGGTAA 2945 Query 93777 GGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGA 93836 ||| |||||||| || || || | ||||| ||||| |||| || || |||| Sbjct 2944 AGTTGTTGAGCGACCACAACACATGATCATGCGTGTCGCTGTCGGTATCTGGGGAGACGA 2885 Query 93837 CATGCCGA-ATGTTTTGCGGG-CTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893 || ||| | | | || | | | || ||| | ||| | || |||| | Sbjct 2884 --TGTCGAGAGGGTCATCGAGACCTACAACCTGATGTCAAATAAGTTCTTCACACATG-C 2828 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 | | || || ||||||| || || || || ||| ||| |||| || || ||||| | Sbjct 2827 CTCGCCCACTTTGTTCAATGCTGGCACGCCTCAGCCCCAGTTGTCATCATGCTTCCTTGT 2768 Query 93954 -GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 ||| | |||| ||| |||| || |||| ||||| ||||||| ||||| | | Sbjct 2767 CGAC-ATGAAGGAGGACAGCATCGAGGGCATTTACGACACCCTCAAGACTTGTGCTATGA 2709 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 |||| || ||||| || ||||| | | || ||| | | ||||||| || || | Sbjct 2708 TCTCCAAGATGGCGGGTGGTATCGGTCTGAACGTGCACCGCATCCGTGCCACCGGCTCAT 2649 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 ||||| || || || ||||| || || ||| || || ||||| ||||||||||||| Sbjct 2648 ACATCGCTGGCACTAACGGCACATCTAATGGCATCACACCAATGCTGCGGGTCTTCAACA 2589 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || | || || ||||| || ||||| || | | | ||| |||| || |||| | Sbjct 2588 ACACCGCCCGATACGTCGATCAGGGCGGCAATAAGCGTCCTGGTGCTTTTGCTATCTACC 2529 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 | ||||| |||||||| || || | ||| | |||||||| |||||||||||||| | Sbjct 2528 TTGAGCCATGGCACGCTGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGG 2469 Query 94253 ATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309 | ||||| | ||| | || || ||| || |||||| | || || ||||| |||| Sbjct 2468 A---GGAGATCCGAGCCCGTGATCTTTTCCTTGCCCTCTGGATCCCCGATCTTTTCATGA 2412 Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT 94369 | || |||||||| ||| | ||||| || | ||||| || || ||||| || || Sbjct 2411 AGCGGGTCGAGAAGAACGGTGACTGGACCCTGATGTGTCCTAACGAGTGTCCTGGCCTCG 2352 Query 94370 CCGAC--GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CA 94426 ||||| | | ||| | | || || | | || | | ||||| | |||| | Sbjct 2351 CCGACTGCTACGGCGAT-GAG-TTCGAGGCTCTCTACGAGCAGTACGAGAAGGAGGGCCG 2294 Query 94427 AGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGG 94486 ||| | | ||| ||| | || |||||||||| || || | || | ||| | Sbjct 2293 AGGTC-GCAAGACCATGAAGGCCCAGAAGCTGTGGTATGCTATTCTCGAAGCTCAGACCG 2235 Query 94487 AGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGC 94546 |||| || | |||| ||| ||| |||||| | ||| |||| ||||||| || Sbjct 2234 AGACTGGCAACCCCTTCATGCTGTATAAGGACCACGCAAACCGCAAGAGCAACCAGAAGA 2175 Query 94547 ACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGG 94606 |||| || || ||||| || || ||||| ||||| ||||||| | | |||| Sbjct 2174 ACCTGGGTACCATTCGAAGCTCCAACCTCTGCACAGAGATCATCGAGTACTGTGCACCGG 2115 Query 94607 ACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTG-TCCACTTTCGTGCGAGATGCC 94665 ||||| | || ||||| ||| ||| |||||| || || || | | | | | || | Sbjct 2114 ACGAGGTCGCCGTGTGCAACTTGGCCTCCAT-----TGCTCTACCTGCATAC--GTTGAC 2062 Query 94666 TAC-ACGTCTACTGCTTC--GTTCGATC---TGGAGGAGCTTGTGAACTTCGCGGGAAGG 94719 ||| || | |||||| | ||| | | || | ||| || || | || Sbjct 2061 TACGACAACAACTGCTACAACTTCCAGCAGTTGCACGAGGTT----AC--CCAGG---TC 2011 Query 94720 ATGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAG 94779 || ||| |||||||||| | | || || || ||| || ||| |||||| | Sbjct 2010 ATCGTCCGCAACCTGAACAAGATCATTGATGTCAATCACTATCCGGTCAAGGAGGCCTAT 1951 Query 94780 AACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTG 94839 ||| ||| || || ||||| || || |||| || |||||| | || ||||| | Sbjct 1950 AACAGCAACATGCGACACCGGCCTATTGGTGTCGGTGTTCAGGGTCTTGCTGACGCATTC 1891 Query 94840 GTGATGATGCGTCTGCCCTACGACTCTGTCGACGC-GGCGGGTTTGAATTTGAACATATT 94898 || | || |||| | ||||||| || || ||| | | ||| | | || || Sbjct 1890 TTGGCCCTTCGCATGCCTTTCGACTCTCCAGAGGCTCGCGAG-CTAAATAAGCAGATCTT 1832 Query 94899 CGAAAGCATTTATTACGGGGC---CA-TGAAACAATCCGTCCACTTGGCCAGATCGGACG 94954 ||| | ||| || | | || || || | ||| || ||| | || | ||| | Sbjct 1831 CGAGACCATCTACCATGCTGCTCTCACTGCATCAA---GTGATATTGCCAAGGT-GGAGG 1776 Query 94955 GCGGGCCACACGAATCGTTCCGCGGATCGCCC-TTGGAACAGGGCATTTTTCAGTTCGAC 95013 || ||| || || | || || |||| | ||||||||| | ||||| ||| Sbjct 1775 GC---CCATAC-AAGACATACGAGGGCAGCCCAGTCTCACAGGGCATCCTGCAGTTTGAC 1720 Query 95014 CTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATC 95073 | ||| ||| ||||| || | || | |||||||| || || | || ||| Sbjct 1719 ATGTGGAATGTCAAGCCTTCCGACCTTTGGGACTGGGATGCGCT---CAAGGACAAGATC 1663 Query 95074 AA--ACAC-GGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCG 95130 || | || ||||| ||| || | |||| || |||||||| || || ||| || Sbjct 1662 AAGGAGACTGGTGTACGCAACAGTTTGTTGCTGGCACCAATGCCCACTGCTTCGACGTCG 1603 Query 95131 CAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGG 95190 |||||||| || ||||| |||| ||||| || | |||||||||| | ||| | | || Sbjct 1602 CAGATCCTGGGTAACAATGAGTGCTTCGAGCCATACACCTCCAACATCTACCAGCGACGT 1543 Query 95191 GTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTG 95250 |||||||| || || |||| ||| ||||| | || || |||| ||||| || Sbjct 1542 GTGCTCGCTGGCGAGTTCCAGGTCGTCAACCCGTGGCTTCTCAGGGATCTGACAGAGCTT 1483 Query 95251 GGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAAC 95310 || ||||| ||| | ||||||| | | || | || ||| |||||| | Sbjct 1482 GGCTTGTGGTCTGAGGCCATGAAGAACCGTATTATCGCCGAGGATGGTTCCATCCAGAGC 1423 Query 95311 ATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAG 95370 || || || |||| || |||||||| || ||||||||||| ||||||||| | ||| Sbjct 1422 ATTCCCAGCATCCCGGCTGATATCAAGGCCCTTTACAAGACCGTCTGGGAGATCTCTCAG 1363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494640445176720