Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq7991 196 5e-45 seq12282 127 2e-24 >seq7991 Length=9451 Score = 196 bits (216), Expect = 5e-45 Identities = 964/1512 (64%), Gaps = 37/1512 (2%) Strand=Plus/Plus Query 153025 ACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGA 153084 || ||||||| || || |||||||| || | ||| |||| | || | ||| ||| Sbjct 1509 ACGGGTTGACGACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGT 1568 Query 153085 AAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACG 153144 | || || ||| | || || || || || || || | ||| | || || ||||| | Sbjct 1569 ATGGCTCGAAGCACTCATTGTTACCCAGGATCTGCGACGTCGAAGCAGTGGGCATTGGTG 1628 Query 153145 CCACCAACAAAGAATTCCGCAAGCC-GTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAA 153203 ||| ||||||| || || | || || || || | | |||||| | ||| | ||| Sbjct 1629 CCAGCAACAAACTGTTGCGTACACCAGTCTCCTTGA-TCTTGTCCTTGAGCGCATCCCAG 1687 Query 153204 TCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCG 153263 ||||| || | || || | | ||||||||||| |||| | | || | | | Sbjct 1688 TCCCAAAGGTCGGAAGGCTTGACATTCCACATGTCAAACTGCAGGATGCCCTGTGAGACT 1747 Query 153264 GGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCG 153323 || ||||| | | || |||| ||| || | ||| | || | || | Sbjct 1748 GGGCTGCCCTCGTATGTCTTGTATGGGCCCTCCACCTTGGCAATATCACTTGATGCAGTG 1807 Query 153324 AGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTC 153383 || || ||| ||| ||||| ||| ||| || ||||| || || || ||| Sbjct 1808 AGAGCAGCATGGTAGATGGTCTCGAAGATCTGCTTATTTAGCTCGCGAGCCTCTGGAGAG 1867 Query 153384 TCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATG 153443 ||| | |||||||| || || || ||||| || |||||||| | |||||| || || Sbjct 1868 TCGAAAGGCATGCGAAGGGCCAAGAATGCGTCAGCAAGACCCTGAACACCGACACCAATA 1927 Query 153444 GGTCGATGCTTCTCGTTGCTGC-----GCCTCGCGCTCGCTATGGGATAGTGATTGCGAT 153498 || || || | ||||||| ||||| || | | |||||||||||| || Sbjct 1928 GGCCGGTGTCGCATGTTGCTGTTATAGGCCTC---CTTG--ACCGGATAGTGATTGACAT 1982 Query 153499 CGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAAT 153558 | || || ||||| |||||||| || | || | || | | | | | | || ||| | Sbjct 1983 CAATGATCTTGTTCAGGTTGCGGACGATGACCTGGGTAACCTCGTGCAACTGCTGGAAGT 2042 Query 153559 CATAG--GTCATT-TCGTCGACG-CGTACGCATCGATTCACGGCAATAGACGCCAGATTA 153614 ||| || || |||| | | |||| ||| | | | ||||| || |||| || Sbjct 2043 TGTAGCAGTTGTTGTCGTAGTCAACGTATGCA--GGTAGA--GCAATGGAGGCCAAGTTG 2098 Query 153615 CAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCAT 153674 || ||||| ||| || | | | ||||| | |||||| | |||||||||| || | Sbjct 2099 CACACGGCGACCTCGTCCGGTGCACAGTACTCGATGATCTCTGTGCAGAGGTTGGAGCTT 2158 Query 153675 TTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATT-GCACGCGTCTTTGAAGAGCAT 153733 ||| |||| || | ||| ||||| ||||| || || | ||| || | ||||| Sbjct 2159 CGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTTGCGTG-GTCCTTATACAGCAT 2217 Query 153734 GTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTATG-CAGGTCCTGCGCTC 153792 | | || ||| |||||| || | ||||| ||| | || ||| | ||| || Sbjct 2218 GAAGGGGTTGCCAGTCTCGGTCTGAGCTTCGAGAATAG-CATACCACAGCTTCTGGGCCT 2276 Query 153793 GCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGT 153852 || || ||| |||||||| ||||||| ||||||| || ||| ||||| | Sbjct 2277 TCATGGTCTTGCGACCTCGGCCCTCCTTCTCGTACTGCTCGTAGAGAGCCTCGAACTCAT 2336 Query 153853 CGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGT 153912 |||||||||||||||||||||| ||||||| | ||||||||||| | ||| | ||| Sbjct 2337 CGCCGTAGCAGTCGGCGAGGCCAGGACACTCGTTAGGACACATCAGGGTCCAGTCACCGT 2396 Query 153913 CGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCG 153972 | ||| || |||||| ||||| || | |||||| || | || || || | Sbjct 2397 TCTTCTCGACCCGCTTCATGAAAAGATCGGGGATCCAGAGGGCAAGGAAAAGATCACGGG 2456 Query 153973 CCTTGCAATCCTCCGCGCC---CATGTTGCGTTTCAGATTGAGCACGCTATAGATGTCGG 154029 | | |||||| ||| | ||||| ||| | || | | ||| || | Sbjct 2457 CTCGGATCTCCTCCTTGCCGTGGTTCTTGCG---CAGGTCAAGGAACTCAAAGACATCAG 2513 Query 154030 CGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATCGA 154086 ||||||| || |||| ||||| || | ||||| |||| || ||||||||||||| Sbjct 2514 CGTGCCATGGCTCAAGGTAGATAGCAAAAGCACCAGGACGCTTATTGCCGCCCTGATCGA 2573 Query 154087 CGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGT 154146 ||| || | | ||||||||||| |||| ||| ||| | ||| | | ||||||| Sbjct 2574 CGTATCGGGCGGTGTTGTTGAAGACCCGCAGCATTGGTGTGATGCCATTAGATGTGCCGT 2633 Query 154147 TGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCC-G 154205 | || | ||| | |||| ||| || | | |||||||| | || || || Sbjct 2634 TAGTGCCAGCGATGTATGAGCCGGTGGCACGGATGCGGTGCACGTTCAGACCGATACCAC 2693 Query 154206 CCGCCGTACTTTGATATGGCAGCGC-AGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCT 154264 ||||| | ||| || || ||| | |||| || || ||| ||||| |||||||| Sbjct 2694 CCGCCAT-CTTGGAGATCATAGCACAAGTC-TTGAGGGTGTCGTAAATGCCCTCGATGCT 2751 Query 154265 ATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGA 154324 || || | | ||| | ||| || || ||| || || |||| || || Sbjct 2752 GTCCTCCTTCATGTCGACAAGGAAGCATGATGACAACTGGGGCTGAGGCGTGCCAGCATT 2811 Query 154325 AAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGAT 154384 || | ||||| || || || || | || | ||||| | ||| || ||||| Sbjct 2812 GAACAAAGTGGGCGAGGCATGTGTGAAGAACTTATTTGACATCAGGTTGTAGGTCTCGAT 2871 Query 154385 GGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGG 154444 | | |||| ||| || || || |||| ||||| ||||||| |||||| || || Sbjct 2872 GACCCTCTCGACATCGTCTCCCCAGATACCGACAGCGACACGCATGATCATGTGTTGTGG 2931 Query 154445 ACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGGTTTTGTAACC 154504 || || | ||| || || | ||| | ||| || |||||||| ||| | || Sbjct 2932 TCGCTCAACAACTTTACCATCGAGCTTGAGGAGGTACGAGCGCTCGAGGGTCTTGAAGCC 2991 Query 154505 GAAATACTTGTA 154516 ||| || | ||| Sbjct 2992 GAAGTATTGGTA 3003 >seq12282 Length=8984 Score = 127 bits (140), Expect = 2e-24 Identities = 345/519 (66%), Gaps = 17/519 (3%) Strand=Plus/Plus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG-- 52383 || || ||| | ||||| ||||| | ||||| ||||||||||| || ||| || Sbjct 7551 GTCCCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAAGTGGATCCAG---GACCGCGAG 7607 Query 52384 -CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442 |||| ||| |||| |||| |||||||| || |||||| | || || |||| Sbjct 7608 TCCACCTATGCCCAGCGACTGGTTGCCTTCGCTGCCGTGGAGGGCATCTTCTTCAGCGGC 7667 Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502 || ||| |||| || | | || | | || | ||||| |||||||| ||| | Sbjct 7668 GCATTCGCCTCCATTTTCTGGCTCAAGAAGCGCGGTCTCATGCCTGGCCTGACCTTCTCC 7727 Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAG 52562 |||||| | || || || || || || |||||||| ||||| || || ||| | | Sbjct 7728 AACGAGCTAATTTCTCGTGATGAGGGTCTGCACACCGACTTCGCTTGTCTCCTGTTCT-- 7785 Query 52563 ACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGT--TCAAGGAGGCGG 52620 | | | ||| ||| | || | ||| | |||| || | ||| ||||| | Sbjct 7786 -CTCACCTGAG-GAATCGTCCGAG-CAAACAGCGTGTTGAGGATATCATCACCGAGGCTG 7842 Query 52621 TGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACG 52680 | || ||||| |||||||| || || | || ||||| || || || ||||||||| Sbjct 7843 TTGCCATCGAGAAGGAGTTCTTGACCGAGGCTCTGCCATGCGCCCTCCTCGGCATGAACT 7902 Query 52681 CGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTC-GGG 52739 | | |||| |||||||||||||||| || || ||||| |||| |||| ||| Sbjct 7903 CCAACCTCATGAAACAGTACATCGAGTTTGTTGCCGACCGTCTACTGGT--CGCTCTGGG 7960 Query 52740 CAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGA 52798 || | ||| | ||| | || || || || || ||| | ||||| || || | Sbjct 7961 CAATGAGAAGGTTTACAAGTCATCAAACCCCTTCGACTTCATGGAGAACATCTCTCTCGG 8020 Query 52799 GGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 |||||||||||||| || |||||||| || || || || Sbjct 8021 TGGCAAGACCAACTTCTTTGAGAAGCGTGTTGGTGACTA 8059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496179387707040