Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq11228 104 2e-17 seq12282 102 8e-17 >seq11228 Length=3802 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||| || | ||| ||||| ||||| || ||||| || | Sbjct 373 CCACCCCGCAGACGAAGCACCAAGTGCAGCGTCGACTCCTTTTGGATGTTGTAGTCAGAC 314 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || | ||| || |||||| | || | || ||||| || || || Sbjct 313 AGTGTCCGGCCATCTTCCAACTGCTTGCCAGCGAAAATAAGACGTTGCTGGTCTGGTGGG 254 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| || || ||||| |||| |||| ||||| | |||||| Sbjct 253 ATGCCCTCCTTGTCCTGAATCTTAGACTTGACGTTG-TCGATTGTGTCTGATGACTCGAC 195 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 ||| | || | ||| || || |||| || || ||||| ||||||||| Sbjct 194 TTCAAGAGTGATCGTCTTTCCCGTCAAGGTCTTGACAAAGATCTGCATG 146 >seq12282 Length=8984 Score = 102 bits (112), Expect = 8e-17 Identities = 158/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 47353 CCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGG 47412 |||| || || ||||| |||| |||||| || ||||||||||||| | | | | Sbjct 7834 CCGAGGCTGTTGCCATCGAGAAGGAGTTCTTGACCGAGGCTCTGCCATGCGCCCTCCTCG 7893 Query 47413 GAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTC 47472 | |||||| | | | |||| | |||||||||| ||||| |||||||| || || || Sbjct 7894 GCATGAACTCCAACCTCATGAAACAGTACATCGAGTTTGTTGCCGACCGTCTACTGGTCG 7953 Query 47473 AGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTT 47532 || || ||| ||||| | | || || ||||| || ||| | ||||| | Sbjct 7954 CTCTGGGCAATGAGAAGGTTTACAAGTCATCAAACCCCTTCGACTTCATGGAGAACATCT 8013 Query 47533 CGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 | |||| |||||||||||||| || |||||||| || || || || Sbjct 8014 CTCTCGGTGGCAAGACCAACTTCTTTGAGAAGCGTGTTGGTGACTA 8059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475421260603680