Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq11228 98.7 9e-16 >seq11228 Length=3802 Score = 98.7 bits (108), Expect = 9e-16 Identities = 148/206 (72%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGTCCAATT 45195 |||||||| || ||||||||||| || || || ||| || | | ||| ||||| | Sbjct 349 TGCAGCGTCGACTCCTTTTGGATGTTGTAGTCA--GACAGTGTCCGGCCATCTTCCAACT 292 Query 45196 GTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTT 45255 | || || ||| | || | ||||||||||| || || ||||| || || || ||||| | Sbjct 291 GCTTGCCAGCGAAAATAAGACGTTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGAATCT 232 Query 45256 TTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCG 45314 | |||| || | || | ||||| || ||||||||||| ||||| | ||| || || Sbjct 231 TAGACTTGA-CGTTGTCGATTGTGTCTGATGACTCGACTTCAAGAGTGATCGTCTTTCCC 173 Query 45315 GTTAGAGTTTTTACAAAAATTTGCAT 45340 || | || || ||||| || ||||| Sbjct 172 GTCAAGGTCTTGACAAAGATCTGCAT 147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451927591164720