Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq7991 190 3e-43 seq12282 120 4e-22 >seq7991 Length=9451 Score = 190 bits (210), Expect = 3e-43 Identities = 1145/1813 (63%), Gaps = 45/1813 (2%) Strand=Plus/Plus Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585 ||||||| |||||| || |||| | |||||||||||||| || |||||||| | Sbjct 1176 TGAACTGGATGGGTGCGGCAGCTGCCTGAGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 1235 Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTC-CATG 115644 | |||||||| | | ||||| || | |||| | | ||| || | |||| Sbjct 1236 CGAGCTTCCAGCCCGCGAAGTGCATACTGGTGATCTTGCCCATGGATGG-CTCCCGCATG 1294 Query 115645 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 115704 || ||||| | || || || || || ||| || || || || | ||| | | Sbjct 1295 TGGATGTTCAGAGACTGAGACTGGTCAATAAAGGCACCACGGTCAGCAGACATCTG---C 1351 Query 115705 ACATCCTTCATCTT---GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 115761 ||| || ||| ||| ||||| || || |||| ||| ||| |||||| | ||| Sbjct 1352 ACAATGGTCCTCTGAGAGATCTCCCAGACGGTCTTGTAAAGGGCCTTGATATCAGCCGGG 1411 Query 115762 ATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTT 115821 || || | ||||| || ||| | | || || | | |||||| ||| Sbjct 1412 ATGCTGGGAATGCTCTGGATGGAACCATCCTCGGCGATAATACGGTTCTTCATGGCCTCA 1471 Query 115822 GACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCA 115881 ||||| | |||| || | |||||| | || | ||||| || ||||| Sbjct 1472 GACCACAAGCCAAGCTCTGTCAGATCCCTGAGAAGCCACGGGTTGACGACCTGGAACTCG 1531 Query 115882 CCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTA 115941 || ||||| |||| | | |||||||||| ||||||||||| ||||||||||||||| Sbjct 1532 CCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCGAAGCACTCATTGTTA 1591 Query 115942 CCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGA 116001 |||| ||| || | || || || |||||||| ||||||| | | |||||||| | | Sbjct 1592 CCCAGGATCTGCGACGTCGAAGCAGTGGGCATTGGTGCCAGCAACAAACTGTTGCGTACA 1651 Query 116002 CCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCC 116061 || | || | || |||||||| || |||||||| | | | || | Sbjct 1652 CCAGTCTCCTTGATCTTGTCCTTGAGCGCATCCCAGTCCCAAAGGTCGGAAGGCTTGACA 1711 Query 116062 TCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATAT 116121 | |||||| |||||||| ||||| || || || |||| ||||| |||||| ||| Sbjct 1712 TTCCACATGTCAAACTGCAGGATGCCCTGTGAGACTGGGCTGCCCTCGTATGTCTTGTAT 1771 Query 116122 GGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCA 116181 |||||||| |||| || | || || ||| || || || || || ||||| Sbjct 1772 GGGCCCTCCACCTTGGCAATATCACTTGATGCAGTGAGAGCAGCATGGTAGATGGTCTCG 1831 Query 116182 AAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATC-AAACGC--GAGACGGCACAAA 116238 || || | ||| | | ||||| || || ||| || | || || ||| Sbjct 1832 AAGATCTGCTTATTTAGCTCGCGAGCCTCTGGAGAGTCGAAAGGCATGCGAAGGGCCAA- 1890 Query 116239 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 116298 ||| | || || ||||| || ||||||| ||||| || || |||| ||| || | Sbjct 1891 --GAATGCGTCAGCAAGACCCTGAACACCGACACCAATAGGCCGGTGTCGCATGTT--GC 1946 Query 116299 TTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTG 116355 | | | || |||| || ||||| ||| ||| || | | | || || || | Sbjct 1947 TGT-TATAGGCCTCCTTGACCGGATAGTGATTGACATCAATGATCTTGTTCAGGTTGCGG 2005 Query 116356 GTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTG 116415 || |||| || | || || | || | | | | | | | | || | | Sbjct 2006 ACGATGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAGCAGTTGTTGTCGTAGTCA 2065 Query 116416 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 116475 || || ||| || || || || |||| || ||||| | | ||| ||| || | Sbjct 2066 ACGTATGCAGGTAGAGCAATGGAGGCCAAGTTGCACACGGCGACCTCGTCCGGTGCACAG 2125 Query 116476 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 116535 ||||| || || || || || | || || || |||||| |||| |||||| || || Sbjct 2126 TACTCGATGATCTCTGTGCAGAGGTTGGAGCTTCGAATGGTACCCAGGTTCTTCTGGTTG 2185 Query 116536 GACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGAC 116595 ||| ||| ||||| || ||||| | || | || ||||| || || | Sbjct 2186 CTCTTGCGGTTTGCGTGGTCCTTATACAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCT 2245 Query 116596 TTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTG---GCTCGCCCCTC 116651 | ||||||||| | ||| | | || | ||| || ||| ||| |||| ||||| Sbjct 2246 TCGAGAATAGCATACCACAGCTTCTG-GGCCTTCA---TGGTCTTGCGACCTCGGCCCTC 2301 Query 116652 CTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGAGCCCTG 116710 || |||||||| |||||| ||||| ||||| || || ||| || | ||| || | Sbjct 2302 CTTCTCGTACTGCTCGTAGAGAGCCTCGAACTCATC-GCCGTAGCAGTCGGCGAGGCCAG 2360 Query 116711 GTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGA 116770 | || | ||||| | || | ||| | ||| || ||| |||||||||||||| | Sbjct 2361 GACACTCGTTAGGACACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAAAA 2420 Query 116771 GGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGAT 116830 | || ||||||||||| || ||| ||||| || || || || | || || | Sbjct 2421 GATCGGGGATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTGCCGTGGT 2480 Query 116831 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 116890 | |||| || | || || | || ||| |||||||| || || ||||| | || | Sbjct 2481 TCTTGCGCAGGTCAAGGAACTCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAA 2540 Query 116891 TTGACCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGC 116947 | || || | || |||| | || || | || || ||| || || | Sbjct 2541 AAGCACCAGGACGCTTATTGCCGCCCTGATCGACGTATCGGGCGGTGTTGTTGAAGACCC 2600 Query 116948 GAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTT 117005 | |||||||| |||| |||| |||| ||| || || || ||| || ||| | | | Sbjct 2601 GCAGCATTGGTGTGATGCCATTAGATGTGCCGTTAGTGCCAGCGATGTATGAGCC--GGT 2658 Query 117006 GGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCA 117065 ||| | || ||| | || || ||| ||||| || ||| ||| ||||| || || Sbjct 2659 GGCACGGATGCGGTGCACGTTCAGACCGATACCACCCGCCATCTTGGAGATCATAGCACA 2718 Query 117066 CTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCA 117125 | |||| || |||| || || ||||| ||| |||| | ||| |||||||| Sbjct 2719 AGTCTTGAGGGTGTCGTAAATGCCCTCGATGCTGTCCTCCTTCATGTCGACAAGGAAGCA 2778 Query 117126 GCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 117185 |||| || ||| || || ||||| ||||| | || || | || || |||| Sbjct 2779 TGATGACAACTGGGGCTGAGGCGTGCCAGCATTGAACAAAGTGGGCGAGGCATGTGTGAA 2838 Query 117186 CATACCT-TGGGACATCTTATCGTAGGTCTCCAAGAC---AGAGGGAATGTCTTCCCCGT 117241 | || | | |||||| | ||||||||| | ||| | | |||| ||| | Sbjct 2839 GA-ACTTATTTGACATCAGGTTGTAGGTCTCGATGACCCTCTCGACATCGTCTCCCCAG- 2896 Query 117242 GAATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGA 117301 ||||||| | ||| ||||| | ||||| ||| ||| || | | ||||||||| Sbjct 2897 --ATACCGACAGCGACACGCATGATCATGTGTTGTGGTCGCTCAACAACTTTACCATCGA 2954 Query 117302 GCCTCTGGAGGTA 117314 || | ||||||| Sbjct 2955 GCTTGAGGAGGTA 2967 >seq12282 Length=8984 Score = 120 bits (132), Expect = 4e-22 Identities = 304/454 (67%), Gaps = 10/454 (2%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| || || |||||||| |||||||| ||||| ||| |||| ||| |||||||| Sbjct 8060 GTAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGAGAGAGATGTTCTCCAT 8001 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCAC--CCCAATCTGTTTGAGGAGA 127348 || || || ||||| ||| || ||| || || |||| | || ||| Sbjct 8000 GAAGTCGAAGGGGTTTGATGACTTGTAAACC-TTCTCATTGCCCAGAGCGACC-AGTAGA 7943 Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408 || || | || |||| ||||||| ||| | |||||||| |||| |||| Sbjct 7942 CGGTCGGCAACAAACTCGATGTACTGTTTCATGAGGTTGGAGTTCATGCCGAGGAGGGCG 7883 Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468 ||||| || || || | |||| ||||||| ||| | ||||| || | ||| | Sbjct 7882 CATGGCAGAGCCTCGGTCAAGAACTCCTTCTCGATGGCAACAGCCTCGGTGATGATATCC 7823 Query 127469 TGAATAG--TGTCCACCCCAGGTCTATTGCGTAAAGTCTT-GAAGAGTTCCACAGCAAAC 127525 | || | ||| | | || | ||| | | | || ||| || ||| || Sbjct 7822 TCAACACGCTGTTTGCTC--GGACGATTCC-TCAGGTGAGAGAACAGGAGACAAGCGAAG 7766 Query 127526 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 127585 || ||| |||||||| ||||| || || || || || |||||| ||| || |||||| Sbjct 7765 TCGGTGTGCAGACCCTCATCACGAGAAATTAGCTCGTTGGAGAAGGTCAGGCCAGGCATG 7706 Query 127586 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 127645 ||||| |||||||| | ||||||||| | |||| ||| ||||||||| |||||| Sbjct 7705 AGACCGCGCTTCTTGAGCCAGAAAATGGAGGCGAATGCGCCGCTGAAGAAGATGCCCTCC 7646 Query 127646 ACACACGCGAACGCAAATAGACGCTCGGCAAAGG 127679 || ||||| |||| || |||| |||| ||| Sbjct 7645 ACGGCAGCGAAGGCAACCAGTCGCTGGGCATAGG 7612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613404575583120