Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq11228 138 3e-27 seq4985 104 6e-17 >seq11228 Length=3802 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || |||||||||||||||| ||||||||||| || |||| |||||| Sbjct 358 AGCACCAAGTGCAGCGTCGACTCCTTTTGGATGTTGTAGTCAGACAGTGTCCGGCCATCT 299 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| || ||||| || ||||| |||||||| || || || || ||| Sbjct 298 TCCAACTGCTTGCCAGCGAAAATAAGACGTTGCTGGTCTGGTGGGATGCCCTCCTTGTCC 239 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| |||| ||||||| || || || || | ||||||||| Sbjct 238 TGAATCTTAGACTTGACGTTGTCGATTGTGTCTGATGACTCGACTTCAAGAGTGATCGTC 179 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| | || || ||||| || || Sbjct 178 TTTCCCGTCAAGGTCTTGACAAAGATCTG 150 Score = 105 bits (116), Expect = 2e-17 Identities = 100/128 (78%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||||||||| || ||||| |||| ||||||||| | | || | ||||| Sbjct 130 AGGACCAGGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCATCC 71 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| || ||||| |||||||||||||| ||| ||| || || ||| Sbjct 70 TCAAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 11 Query 199538 TGAATCTT 199545 || ||||| Sbjct 10 TGGATCTT 3 >seq4985 Length=7965 Score = 104 bits (114), Expect = 6e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || |||||||| || |||||||| |||| ||||||||| | | || Sbjct 7818 CGCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTG 7877 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| ||||||||||| |||||||||||||| || ||| ||| Sbjct 7878 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCT 7937 Query 199529 TCTCGCTCCTGAATCTT 199545 || ||||| ||||| Sbjct 7938 TCCTTGTCCTGGATCTT 7954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178719465786594