Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq7991 253 3e-62 seq12282 107 2e-18 >seq7991 Length=9451 Score = 253 bits (280), Expect = 3e-62 Identities = 1183/1853 (64%), Gaps = 85/1853 (5%) Strand=Plus/Minus Query 111556 TCAAGACCCTCGAGAAAAGCTACCTCCAAAGACTGGATGGTG----TCTTGATGGAAACC 111611 |||||||||||||| ||||||| | || |||||| | |||| || Sbjct 2987 TCAAGACCCTCGAGCGCTCGTACCTCCTCAAGCTCGATGGTAAAGTTGTTGAGCGA---- 2932 Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 ||||| ||||| ||||||| ||||| |||||||| || || ||| | || || Sbjct 2931 CCACAACACATGATCATGCGTGTCGCTGTCGGTATCTGGGGAGACGATGTCGAGAGGGTC 2872 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | ||||| ||| || |||||| | | |||| || || | || || | ||| Sbjct 2871 ATCGAGACCTACAACCTGATGTCAAATAAGTTCTTCACACATGCCTCGCCCACTTTGTTC 2812 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 || ||||| || || ||||| |||| || |||||| | | | |||||||| Sbjct 2811 AATGCTGGCACGCCTCAGCCCCAGTTGTCATCATGCTTCCTTGTCGACATGAAGGAGGAC 2752 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 ||| | |||||||||| ||| |||| ||||| ||||| ||| ||| ||| Sbjct 2751 AGCATCGAGGGCATTTACGACACCCTCAAGACTTGTGCTATGATCTCCAAGATGGCGGGT 2692 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTACAA 111909 |||||||| || || | || || | |||| | | ||| || | | || || | Sbjct 2691 GGTATCGGTCTGAACGTGCACCGCATCCGTGCCACC--GGCTCATACATCGCTGGCACTA 2634 Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969 | || ||| |||| || | |||||||| || || || ||| ||| || || || | Sbjct 2633 ACGGCACATCTAATGGCATCACACCAATGCTGCGGGTCTTCAACAACACCGCCCGATACG 2574 Query 111970 TAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 112023 | | || | || ||||| || || | || |||| ||||||||||||| Sbjct 2573 TCGATCAGGGCGGCAATAAGCGTCCT---GGTGCTTTTGCTATCTACCTTGAGCCATGGC 2517 Query 112024 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGT 112083 |||| ||| || | ||||||||||| |||| ||||| || | |||||| || Sbjct 2516 ACGCTGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGATCCGAG 2457 Query 112084 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 112143 ||| ||||| ||| || |||||||| || ||||| ||||||||| | || ||| ||| Sbjct 2456 CCCGTGATCTTTTCCTTGCCCTCTGGATCCCCGATCTTTTCATGAAGCGGGTCGAGAAGA 2397 Query 112144 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTG 112203 || | ||| | || | ||||| || || || || ||| |||| | || | Sbjct 2396 ACGGTGACTGGACCCTGATGTGTCCTAACGAGTGTCCTGGCCTCGCCGACTGCTACGGCG 2337 Query 112204 AGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGA------AAGTCGGGCGACTGCGA 112257 | ||||| || || |||||| |||||||| | || | |||| ||| || Sbjct 2336 ATGAGTTCGAGGCTCTCTACGAGCAGTACGAGAAGGAGGGCCGAGGTCGCAAGACCATGA 2277 Query 112258 CGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 112317 || |||| || ||||| | ||||||||| | |||| ||||||||||| | | Sbjct 2276 AGGC-CCAGAAGC-----TGTGGTATGCTATTCTCGAAGCTCAGACCGAGACTGGCAACC 2223 Query 112318 CATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 112377 | | ||||| || || ||| | |||| ||||| || || ||||| ||||| | Sbjct 2222 CCTTCATGCTGTATAAGGACCACGCAAACCGCAAGAGCAACCAGAAGAACCTGGGTACCA 2163 Query 112378 TCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAA--GATGAGACGGC 112435 | || ||||||||||| ||||| ||| | || | || | | || ||| || Sbjct 2162 TTCGAAGCTCCAACCTCTGCACAGAGATCATCGAGT--ACTGTGCACCGGACGAGGTCGC 2105 Query 112436 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT 112495 ||||| ||| | || || || ||||| || || || || | ||||| || Sbjct 2104 CGTGTGCAACTTGGCCTCCATTGCTCTACCTGCATACGTTGA--CTACGACAACAACTGC 2047 Query 112496 TG--ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTT 112553 | | | | | | ||||| ||||| | || ||||| |||| | Sbjct 2046 TACAACTTCCAGCAGTTGCACGAGGTTACCCAGGTCATCGTCCGCAACCTGAACAAGATC 1987 Query 112554 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 112613 |||||| ||| || || || || || ||| || ||| ||||||| || Sbjct 1986 ATTGATGTCAATCACTATCCGGTCAAGGAGGCCTATAACAGCAACATGCGACACCGGCCT 1927 Query 112614 ATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTG----TCGCCACGCATT 112669 |||||| ||||||| || ||||| || || | ||||||| | |||| | || || Sbjct 1926 ATTGGTGTCGGTGTTCAGGGTCTTGCTGACG----CATTCTTGGCCCTTCGC-ATGCCTT 1872 Query 112670 T-GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCG 112728 | || || || || || | ||| || || || ||||| || || || || | Sbjct 1871 TCGACTCTCCAGAGGCTCGCGAGCTAAATAAGCAGATCTTCGAGACCATCTACCATGCTG 1812 Query 112729 CTCT---TGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGG 112785 |||| || | ||| || | || |||| || || ||||| | || | |||| Sbjct 1811 CTCTCACTGCATCAAGT---GATATTGCCAAGGTGGAGGGCCCATACAAGACATACGAGG 1755 Query 112786 GTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTC 112845 | |||| ||||| || | || || ||||| |||||| || || ||||| | Sbjct 1754 GCAGCCCAGTCTCACAGGGCATCCTGCAGTTTGACATGTGG-AATGT-----CAAGCCTT 1701 Query 112846 ACTAC------GACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACA 112899 | || |||||||| || |||||||| |||||||||| ||| | || |||| Sbjct 1700 CCGACCTTTGGGACTGGGATGCGCTCAAGGACAAGATCAAGGAGACTGGTGTACGCAACA 1641 Query 112900 GTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAAT 112959 || | ||| ||||||||||||| || || || || | || ||| ||||||| ||||| | Sbjct 1640 GTTTGTTGCTGGCACCAATGCCCACTGCTTCGACGTCGCAGATCCTGGGTAACAATGAGT 1581 Query 112960 GCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGA 113019 |||| || || ||||| | |||||||| | | || | ||||| || ||||| | Sbjct 1580 GCTTCGAGCCATACACCTCCAACATCTACCAGCGACGTGTGCTCGCTGGCGAGTTCCAGG 1521 Query 113020 TTGTCAAC---AAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATA 113076 | |||||| || |||| |||| || | |||| |||| | ||||| ||| | Sbjct 1520 TCGTCAACCCGTGGCTTCTCAGGGAT---CTGACAGAGCTTGGCTTGTGGTCTGAGGCCA 1464 Query 113077 TGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATG 113136 ||||| | | || | | || ||||||||| || | ||| || || | || Sbjct 1463 TGAAGAACCGTATTATCGCCGAGGATGGTTCCATCCAGAGCATTCCCAGCATCCCGGCTG 1404 Query 113137 AAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTG---ACA 113193 | || ||| | ||| || || ||||| ||| | |||| ||||| | | Sbjct 1403 ATATCAAGGCCCTTTACAAGACCGTCTGGGAGATCTCTCAG-AGGA--CCATTGTGCAGA 1347 Query 113194 TGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATG-GAA 113252 || | || || |||||| ||| ||||| || ||| | |||| | |||| | Sbjct 1346 TGTCTGCTGACCGTGGTGCCTTTATTGACCAGTCTCAGTCTCTGAACATCCACATGCGGG 1287 Query 113253 AGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAA 113312 || ||| | ||| |||| || | ||||||| | | |||||| |||||||| Sbjct 1286 AG-CCATCCATGGGCAAGATCACCAGTATGCACTTCGCGGGCTGGAAGCTCGGTCTCAAG 1228 Query 113313 ACGGGGATGTATTACCTCCGATCTAAGGCAAAGGCGCGC-CCAATTCAGTTCA 113364 || || ||||| |||||||| || ||||| || ||| || || ||||||| Sbjct 1227 ACTGGCATGTACTACCTCCGCACTCAGGCAGCTGC-CGCACCCATCCAGTTCA 1176 >seq12282 Length=8984 Score = 107 bits (118), Expect = 2e-18 Identities = 153/215 (71%), Gaps = 8/215 (4%) Strand=Plus/Plus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCG 102169 ||| || || || | ||||| || || |||||| |||||||| || || |||| Sbjct 7550 AGTCCCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAAGTGG----ATCCAGGACCGCG 7605 Query 102170 TT----CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225 ||| ||| ||||||| | || || || || ||||| ||||||||| | Sbjct 7606 AGTCCACCTATGCCCAGCGACTGGTTGCCTTCGCTGCCGTGGAGGGCATCTTCTTCAGCG 7665 Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 | | ||| | | |||| |||||||||||||| ||||||||||| || || ||||| Sbjct 7666 GCGCATTCGCCTCCATTTTCTGGCTCAAGAAGCGCGGTCTCATGCCTGGCCTGACCTTCT 7725 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||||||| || |||||||| ||||| || ||| Sbjct 7726 CCAACGAGCTAATTTCTCGTGATGAGGGTCTGCAC 7760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620638565315040