Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq7991 214 2e-50 seq12282 102 1e-16 >seq7991 Length=9451 Score = 214 bits (236), Expect = 2e-50 Identities = 1149/1792 (64%), Gaps = 73/1792 (4%) Strand=Plus/Plus Query 105558 TGAACTGAATTGG-GCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGT 105616 ||||||| || || ||| || ||||| || ||||| |||||||| || |||||||| Sbjct 1176 TGAACTGGATGGGTGCG-GCAGCTGCCTGAGTGCGGAGGTAGTACATGCCAGTCTTGAGA 1234 Query 105617 CCTTGTTTCCA---CGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTC- 105672 || | ||||| |||| | |||||| | || |||| ||| | ||| || | Sbjct 1235 CCGAGCTTCCAGCCCGCGAAG---TGCATACTGGTGATCTTGCCCATGGATGG-CTCCCG 1290 Query 105673 CATGAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCATAT- 105731 |||| | |||| | ||| ||||||||| ||| |||||| | || | ||| | Sbjct 1291 CATGTGGATGTTCAGAGACTGAGACTGGTCAATAAAGGCACCACGGTCAGCAGACATCTG 1350 Query 105732 --CAATGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATC 105789 ||||| |||| | ||| ||||| || || ||| || |||||||||| | Sbjct 1351 CACAATGG--TCCT-CTGAGAGATCTCCCAGACGGTCTTGTAAAGGGCCTTGATATCAGC 1407 Query 105790 TGGGATATCTGAGA-TATTTTGAATTGAACCCCCCGCCTTGACCATGAGATCCTTCATAT 105848 ||||| ||| || | | || || ||||| || | || || | | |||||| Sbjct 1408 CGGGATG-CTGGGAATGCTCTGGATGGAACCATCCTCGGCGATAATACGGTTCTTCATGG 1466 Query 105849 CCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATCACAA 105908 ||| ||||| | |||| || | ||||| ||| || | |||||| | | | Sbjct 1467 CCTCAGACCACAAGCCAAGCTCTGTCAGATCCCTGAGAAGCCACGGGTTGACGACCTGGA 1526 Query 105909 ACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCAT 105968 |||| || ||||| | || | | |||||||| | ||||| || || ||||| |||| Sbjct 1527 ACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCGAAGCACTCAT 1586 Query 105969 TATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTAC 106028 | ||||||| ||| || | || || || || ||||||||||||| ||| | |||||| | Sbjct 1587 TGTTACCCAGGATCTGCGACGTCGAAGCAGTGGGCATTGGTGCCAGCAACAAACTGTTGC 1646 Query 106029 GAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTT 106087 | | ||| | |||||||| |||||||| |||||||||| | | | || | Sbjct 1647 GTACACCAGTCTCCTTGATCTTGTCCTTGAGCGCATCCCAGTCCCAAAGGTCGGAAGGCT 1706 Query 106088 TCACCTTCCCACATATCAAATTGAAGCAC-CCCT-TGGGACGTGGGAGAACCCTCAAATG 106145 | || |||| |||| ||||| || || | |||| || ||| || | ||||| ||| Sbjct 1707 TGACATTCC-ACATGTCAAACTGCAGGATGCCCTGTGAGACTGGGCTG--CCCTCGTATG 1763 Query 106146 TCTCATA-GGAACCTTGGGCTTCAGCCAAT-TCACAGCTCGCCTCCAGGGATGCGTGATA 106203 ||| || || ||| ||| | |||| |||| || || | || || || Sbjct 1764 TCTTGTATGGGCCCTCCACCTT--GGCAATATCACTTGATGCAGTGAGAGCAGCATGGTA 1821 Query 106204 CATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAA-----TGCG 106258 ||||| || ||||| | ||| | ||| || || || || || |||| Sbjct 1822 GATGGTCTCGAAGATCTGCTTATTTAGCTCGCGAGCCTCTGGAGAGTCGAAAGGCATGCG 1881 Query 106259 TAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGT 106318 || ||| ||| | || | || || ||||| |||||||| | ||||||||| | |||| Sbjct 1882 AAG-GGC-CAAGA---ATGCGTCAGCAAGACCCTGAACACCGACACCAATAGGCCGGTGT 1936 Query 106319 CGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTT 106378 ||||| || || || || || ||||| ||| ||||||| ||| Sbjct 1937 CGCATGTTGCTGTTATAGGCCTCCTTGACCGGATAGTGATTGACATCAATGATCTTGTTC 1996 Query 106379 AGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAA--AGTGCGAG 106436 || || | | | || || | || || | | | | | | ||| | Sbjct 1997 AGGTTGCGGACGATGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAGCAGTTGTTG 2056 Query 106437 TC-TCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCA 106495 || | ||| || || || || || || || ||||| ||||| || || ||| Sbjct 2057 TCGTAGTCA---ACGTATGCAGGTAGAGCAATGGAGGCCAAGTTGCACACGGCGACCTCG 2113 Query 106496 TCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAA 106555 ||| | |||||| | || ||||| || | |||||| || ||| || |||| Sbjct 2114 TCCGGTGCACAGTACTCGATGATCTCTGTGCAGAGGTTGGAGCTTCGAATGGTACCCAGG 2173 Query 106556 TTCTTTTGGTTACTCTTTTTGTT-GCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGT 106614 ||||| ||||| ||||| ||| || | ||||| || |||||| |||| | || || Sbjct 2174 TTCTTCTGGTTGCTCTTGCGGTTTGCGTGG-TCCTTATACAGCATGAAGGGGTTGCCAGT 2232 Query 106615 CTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGG 106673 ||| ||||| | | |||||| || | ||||| | || | | || |||| ||| Sbjct 2233 CTCGGTCTGAGCTTCGAGAATAGCATACCACAGCTTCTGGGCCTTC----ATGGTCTTGC 2288 Query 106674 ---CCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGT 106730 | || |||||| |||||||| |||||| || || ||||| || || || Sbjct 2289 GACCTCGGCCCTCCTTCTCGTACTGCTCGTAGAGAGCCTCGAACTCATCGCCGTAGCAGT 2348 Query 106731 CGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCC 106790 ||| ||| || || || || ||||| | || | ||| | ||| || ||| |||| Sbjct 2349 CGGCGAGGCCAGGACACTCGTTAGGACACATCAGGGTCCAGTCACCGTTCTTCTCGACCC 2408 Query 106791 GCTTCATGAAAAGGTCTGGAATCCACAGGG-ATGAAAAGAGATCTCTACACCGAGCCTCT 106849 ||||||||||||| || || ||||| |||| | | ||| ||||| | || ||| Sbjct 2409 GCTTCATGAAAAGATCGGGGATCCAGAGGGCAAGGAAA-AGATCACGGGCTCGGATCTCC 2467 Query 106850 TCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCA 106909 || | || ||||| || | ||||||||||| | || ||| ||||||||||||||| Sbjct 2468 TCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCAGCGTGCCATGGCTCA 2527 Query 106910 AGATAGACTGCGATAGATCC------CTT-TCGACGCCCAGCTTGATTTACATAGCGCGC 106962 || |||| || | || || ||| | | ||||| |||| || || || || Sbjct 2528 AGGTAGATAGCAAAAGCACCAGGACGCTTATTGCCGCCC----TGATCGACGTATCGGGC 2583 Query 106963 TGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCC 107021 ||| ||| || || || |||||||| | || |||| ||| || || || || | Sbjct 2584 GGTGTTGTTGAAGACCCGCAGCATTGGTGTGATGCCATTAGATGTGCCGTTAGTGCCAGC 2643 Query 107022 GA-ATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCAC 107080 || || ||| |||| | | || | || || || ||||| || ||| | Sbjct 2644 GATGTATGAG--CCGGTGGCACGGATGCGGTGCACGTTCAGACCGATACCACCCGCCATC 2701 Query 107081 TTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTG 107140 || ||||| ||||| | | || || | || || || | ||| ||||||||| Sbjct 2702 TTGGAGATCATAGCACAAGTCTTGAGGGTGTCGTAAATGCCCTCGATGCTGTCCTCCTTC 2761 Query 107141 TTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTT 107200 || ||| ||||||||| |||| ||| || || || ||||||||||| | || Sbjct 2762 ATGTCGACAAGGAAGCATGATGACAACTGGGGCTGAGGCGTGCCAGCATTGAACAAAGTG 2821 Query 107201 GGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATC 107259 || | || || |||| | || | | |||||| || ||| ||||| | ||| || Sbjct 2822 GGCGAGGCATGTGTGAAGA-ACTTATTTGACATCAGGTTGTAGGTCTCGATGACCCTCTC 2880 Query 107260 AATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGGT 107311 | || || || ||| |||| || |||||||| | ||||| ||| ||| Sbjct 2881 GACATCGTCTCCCCAGATACCGACAGCGACACGCATGATCATGTGTTGTGGT 2932 >seq12282 Length=8984 Score = 102 bits (112), Expect = 1e-16 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| ||||||||||| || ||||| || || || |||||| ||||| ||||||||||| Sbjct 7760 GTGCAGACCCTCATCACGAGAAATTAGCTCGTTGGAGAAGGTCAGGCCAGGCATGAGACC 7701 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| |||| | | ||||| ||| ||||||||| |||||||| Sbjct 7700 GCGCTTCTTGAGCCAGAAAATGGAGGCGAATGCGCCGCTGAAGAAGATGCCCTCCACGGC 7641 Query 117405 CGCAAACGCAAAAAGGCGCTCGGC 117428 || || |||| || |||| ||| Sbjct 7640 AGCGAAGGCAACCAGTCGCTGGGC 7617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589882110961680