Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq4985 107 4e-18 seq11228 91.5 3e-13 >seq4985 Length=7965 Score = 107 bits (118), Expect = 4e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || ||||| |||| || || | || || ||| Sbjct 7830 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 7889 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || |||||||| ||||||||||| ||||| || Sbjct 7890 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGG 7949 Query 195052 ATTTTTTGCTTGAC 195065 || || |||||| Sbjct 7950 ATCTTGGACTTGAC 7963 >seq11228 Length=3802 Score = 91.5 bits (100), Expect = 3e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||| || || || || || ||||| || | || |||| ||||| || Sbjct 127 ACCAGGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCATCCTCA 68 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || || ||||| ||||||||||| || ||||| || Sbjct 67 AGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGG 8 Query 195052 ATTTT 195056 || || Sbjct 7 ATCTT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109291371751994