Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq11228 89.7 3e-13 >seq11228 Length=3802 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || || || ||||| ||||| || || | || |||| ||| Sbjct 355 ACCAAGTGCAGCGTCGACTCCTTTTGGATGTTGTAGTCAGACAGTGTCCGGCCATCTTCC 296 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||| || || || || || || |||||||||||| | || | ||||||||||| | Sbjct 295 AACTGCTTGCCAGCGAAAATAAGACGTTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGA 236 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | || | ||| || || | || || || ||| Sbjct 235 ATCTTAGACTTGACGTTGTCGATTGTGTCTGATGACTCGACTTCAAGAGTGATCGTCTTT 176 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||| | ||||| |||||||||||||| Sbjct 175 CCCGTCAAGGTCTTGACAAAGATCTGCAT 147 Score = 84.2 bits (92), Expect = 1e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| |||||||| ||| |||| |||| || ||||| ||||| ||||| Sbjct 110 TTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCATCCTCAAGCTGCTTTCCAGCAAA 51 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || || || |||||||| | || | ||||||||||| Sbjct 50 GATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTC 12 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324580654491696