Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq5359 170 2e-37 >seq5359 Length=3099 Score = 170 bits (188), Expect = 2e-37 Identities = 286/409 (70%), Gaps = 26/409 (6%) Strand=Plus/Minus Query 29988 CACGTAAAACTG---ACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 30044 |||||||||||| | ||||| |||||||| || || ||||| || ||| Sbjct 2628 CACGTAAAACTGGGCAAACATG---TGGCACGGCGGCAGCGCCATCTTCTTCAGGTCGGC 2572 Query 30045 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTC 30101 |||||||| |||| || ||||||||||| || | ||||||||||||| || || | Sbjct 2571 CGGGTTCCACGCGCTCAGGATGATGCGCCGATCGTACGGGTTGTTCCTGAGCTTGTGGAC 2512 Query 30102 CACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTA 30161 || || |||||| || || ||| |||| |||||| |||||| ||| ||| Sbjct 2511 AACCTCGGC---CAGCTGGTCGACGCCCTGGCCCGTGTAGTCGGCCCTCGCGTCGACGTA 2455 Query 30162 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30221 ||| || || || |||| |||||||||||||||||| || |||||||| || | || | Sbjct 2454 CTCGGCGCCAAAGTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCGGCCTCGCG 2395 Query 30222 GTGCTCGAAGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTA 30280 ||| | |||||| | |||| | | || | || |||||| ||||||||||||| | Sbjct 2394 GTG-GCCCAGCCCCACGCTGTCGAGGTACTCGCGAGAGCCGTTGCCGTCCCAGATCTTGA 2336 Query 30281 CCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGAC------CCTCTGACGAACCACAGCA 30334 | |||| || ||||| |||| | ||| || || ||||||||||| Sbjct 2335 CGCCCTGTTCCGAGAG------GGAGAGCGACGACGTCTCGCCCGAGATGAACCACAGCA 2282 Query 30335 GCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 |||| | | ||| |||||| ||||| | |||||| |||||||| || Sbjct 2281 GCTCGGCGAGGACCGCCTTCTGGAAGACGCGCTTGGTTGTGAGGAGCGG 2233 Score = 118 bits (130), Expect = 9e-22 Identities = 143/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 29779 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCT 29838 ||||||||||| ||||| | |||||| || ||||| || ||||||||| ||||| Sbjct 2921 GGCTCCCTCTCCAGCTGCACCCTCAGCGCGTCGACGTGGTCGGCGTAGACGTGGGCGTCG 2862 Query 29839 CCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 29897 |||| | ||| | || || ||||| | || || |||||| || ||||||| ||| Sbjct 2861 CCCATGACGTGCGTCAGGCTG-CCCGGGACGAGGTCGCAGACGTGCGCGATCATGTGCGT 2803 Query 29898 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTG 29957 || || ||||||||||||||||| ||||| || || || |||||||| | || | ||| Sbjct 2802 CAGCAGCGAGTAGCTGGCGATGTTGAAGGGGACGCCCAGGCCCATGTCGCAGGAGCGCTG 2743 Query 29958 GTAGAGCTGACA 29969 || ||||| || Sbjct 2742 ATACAGCTGGCA 2731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408550957278686