Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq7991 307 2e-78 seq12282 159 6e-34 >seq7991 Length=9451 Score = 307 bits (340), Expect = 2e-78 Identities = 899/1378 (65%), Gaps = 19/1378 (1%) Strand=Plus/Plus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| | |||||| || || | |||||| | | |||||| | ||| || ||||| Sbjct 1511 GGGTTGACGACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTAT 1570 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 ||||||| || ||| ||||| ||||| ||||| | || || |||||||| || ||| Sbjct 1571 GGCTCGAAGCACTCATTGTTACCCAGGATCTGCGACGTCGAAGCAGTGGGCATTGGTGCC 1630 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCC 213086 | || | |||||| | || || ||| ||| | | ||| | |||||||| Sbjct 1631 AGCAACAAACTGTTGCGTACACCAGTCTCCTTGATCTTGTCCTTGAGCGCATCCCAGTCC 1690 Query 213087 CATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146 || | | || ||| ||| || ||||||||||||||||||| |||||| | Sbjct 1691 CAAAGGTCGGA-AGG--------CTTGACATTCCACATGTCAAACTGCAGGATGCCCTGT 1741 Query 213147 CTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGAC 213206 || |||||||||| ||| | ||| ||||| | | ||||||| | || | || Sbjct 1742 GAGACTGGGCTGCCCTCGTATGTCTTGTATGGGCCCTCCACCTTGGCAATATCACTTGAT 1801 Query 213207 GCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCT 213266 || || ||||| | ||||||||| || || |||| | | || |||| |||||| Sbjct 1802 GCAGTGAGAGCAGCATGGTAGATGGTCTCGAAGATCTGCTTATTTAGCTCGCGAGCCTCT 1861 Query 213267 GGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATG 213326 || || ||| ||||| | | ||| | ||||| || ||||| || |||| Sbjct 1862 GGAGAGTCGAAAGGCATGCGAAGGGCCAAGAATGCGTCAGCAAGACCCTGAACACCGACA 1921 Query 213327 CCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAG 213386 || || || | ||||| || ||| || || ||||| | || || ||| Sbjct 1922 CCAATAGGCCGGTGTCGCATGTTGCTGTTATAGGCCTCCTTGACCGGATAGTGATTGACA 1981 Query 213387 TCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGA 213446 || ||||||||||| ||||||||| | || | ||| || | | || | || | Sbjct 1982 TCAATGATCTTGTTCAGGTTGCGGACGATGACCTGGGTAACCTCGTGCAACTGCTGGAAG 2041 Query 213447 TTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAA 213506 ||| | || | ||| | || | |||| || || ||| ||||| |||||| Sbjct 2042 TTGTAGCAGTTGTTGTCGTAGTCAACGTATGCAGGTAGAGCAATGGAGGCCAAGTTGCAC 2101 Query 213507 ACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGG 213566 ||||| ||||| | | | |||||| |||||||| ||||| |||||| || ||| Sbjct 2102 ACGGCGACCTCGTCCGGTGCACAGTACTCGATGATCTCTGTGCAGAGGTTGGAGCTTCGA 2161 Query 213567 ATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAG 213626 ||||| |||||||||| ||||| ||| ||| || ||||| || |||||| || Sbjct 2162 ATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTTGCGTGGTCCTTATACAGCATGAAG 2221 Query 213627 GGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACC 213686 ||| || ||||| ||| | | || || ||| || | | |||||| | Sbjct 2222 GGGTTGCCAGTCTCGGTCTGAGCTTCGAGAATAGCATACCACAGCTTCTGGGCCTT---C 2278 Query 213687 ACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGG 213746 | | || | ||| | | ||||||||| |||||||| | | ||| || | | Sbjct 2279 ATGGTCTTGCGACCTCGGCCCTCCTTCTCGTACTGCTCGTAGAGAGCCTCGAACTCATCG 2338 Query 213747 CCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGT-C 213805 || || | | || || ||||| |||||||| ||| ||||||| |||| | Sbjct 2339 CCGTAGCAGTCGGCGAGGCCAGGACACTCGTTAGGACACATCAGGGTCCAGTCACCGTTC 2398 Query 213806 ATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGT 213865 |||| ||| | || |||||| || || |||| ||| || || ||| || || | || Sbjct 2399 TTCTC-GACCCGCTTCATGAAAAGATCGGGGATCCAGAGGGCAAGGAAAAGATCACGGGC 2457 Query 213866 CCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTG 213925 | |||| ||| || ||| |||||||| || || || ||||||| || ||||| Sbjct 2458 TCGGATCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCAGCGTG 2517 Query 213926 CCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTT---GCCGCCCTGGTCCACCAG 213982 ||| ||||| | |||||| ||||| || || || | ||| ||||||||| || || Sbjct 2518 CCATGGCTCAAGGTAGATAGCAAAAGCACCAGGACGCTTATTGCCGCCCTGATCGACGTA 2577 Query 213983 CCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGT-CCGTTGG 214041 | ||| ||||||||| ||||| | ||| | || || || ||| ||||| | Sbjct 2578 TCGGGCGGTGTTGTTGAAGACCCGCAGCATTGGTGTGATGCCATTAGA-TGTGCCGTTAG 2636 Query 214042 TTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGG 214101 | || || || || ||||||| ||| | | | | || | || || || ||||| | Sbjct 2637 TGCCAGCGATGTATGAGCCGGTGGCACGGATGCGGTGCACGTTCAGACCGATACCACCCG 2696 Query 214102 CGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCAT 214161 | |||||||||||| || || | | | || || ||||| | |||||||| | Sbjct 2697 CCATCTTGGAGATCATAGCACAAGTCTTGAGGGTGTCGTAAATGCCCTCGATGCTGTCCT 2756 Query 214162 CTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAA 214221 | | | || | | |||||| || | ||||||| | || ||||| ||||| | Sbjct 2757 CCTTCATGTCGACAAGGAAGCATGATGACAACTGGGGCTGAGGCGTGCCAGCATTGAACA 2816 Query 214222 GCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGAC 214279 ||||| |||||| | | ||||| || || | || |||||||||| | ||| Sbjct 2817 AAGTGGGCGAGGCATGTGTGAAGAACTTATTTGACATCAGGTTGTAGGTCTCGATGAC 2874 >seq12282 Length=8984 Score = 159 bits (176), Expect = 6e-34 Identities = 303/442 (69%), Gaps = 17/442 (4%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | |||||||||||||| ||||| || | | ||||||||||| Sbjct 8063 CTGGTAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGAGAGAGATGTTCTC 8004 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCA-GGCCCATCTGTTCCAGCA 47957 ||||||| ||||||||| | || || || | || | ||| ||||| |||| | Sbjct 8003 CATGAAGTCGAAGGGGTTTGATGACTTGTA-AACCTTCTCATTGCCCAGAGCGACCAGTA 7945 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | | || || || |||||||||| | | ||||||| || ||||||||| | ||||| Sbjct 7944 GACGGTCGGCAACAAACTCGATGTACTGTTTCATGAGGTTGGAGTTCATGCCGAGGAGGG 7885 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 |||| ||||| || | ||||||||||| || || || || | || | Sbjct 7884 CGCATGGCAGAGCCTCGGTCAAGAACTCCTTCTCGATGGCAACAGCCTCGGTGATGATAT 7825 Query 48078 GCTTAACGCGGGACTCTGAG---GGTTTGTTGCGCAGGTGCTTGGCATAGAGCATG---C 48131 || ||| || || | | || || | |||||| | ||| || | | Sbjct 7824 CCTCAACACG---CTGTTTGCTCGGACGATTCCTCAGGTG------AGAGAACAGGAGAC 7774 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 | || ||||| |||||| || || || || || ||| ||||||||||| || | Sbjct 7773 AAGCGAAGTCGGTGTGCAGACCCTCATCACGAGAAATTAGCTCGTTGGAGAAGGTCAGGC 7714 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 ||||||||| || | || |||||||||||||| | ||||| | ||| |||||||| Sbjct 7713 CAGGCATGAGACCGCGCTTCTTGAGCCAGAAAATGGAGGCGAATGCGCCGCTGAAGAAGA 7654 Query 48252 TGCCCTCCACTGCCGCGAACGC 48273 |||||||||| || ||||| || Sbjct 7653 TGCCCTCCACGGCAGCGAAGGC 7632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931376977850880