Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq4614 122 6e-22 seq11228 87.8 1e-11 >seq4614 Length=12099 Score = 122 bits (134), Expect = 6e-22 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796 || || || |||||||| || ||||| || || ||||| ||||||||||| || ||||| Sbjct 11176 GCCGTCATCACTGTTCCCGCCTATTTCAACGACTCTCAGCGTCAAGCAACCAAGGATGCT 11235 Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856 || ||||| || || |||||| | ||||| || ||||||||||| || ||||| || Sbjct 11236 GGTCTTATTGCCGGCCTGAATGTTCTGCGTATCATCAATGAACCAACCGCCGCCGCCATT 11295 Query 474857 GCTTATGGTCTTGATAAGAA 474876 ||||||||||| || ||||| Sbjct 11296 GCTTATGGTCTCGACAAGAA 11315 >seq11228 Length=3802 Score = 87.8 bits (96), Expect = 1e-11 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || ||||| || || || || ||| ||| || | || || || | || || Sbjct 140 ACGGAGGCGGAGGACCAGGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCCGAGAGGGT 81 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || | ||| ||||| |||||||||||||| || ||||| || || ||||||||||| || Sbjct 80 TCGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGAATGCC 21 Query 480671 TTCCTTGTCTTGAATCTT 480688 |||||||| || ||||| Sbjct 20 CTCCTTGTCCTGGATCTT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267605181090536