Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq7991 183 4e-41 seq12282 102 1e-16 >seq7991 Length=9451 Score = 183 bits (202), Expect = 4e-41 Identities = 1135/1788 (63%), Gaps = 67/1788 (4%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 ||||| ||||| ||||||| ||||| |||| ||| || || || | || ||| Sbjct 2931 CCACAACACATGATCATGCGTGTCGCTGTCGGTATCTGGGGAGACGATGTCGAGAGGGTC 2872 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || |||||| | | || | |||| || || | || || | || Sbjct 2871 ATCGAGACCTACAACCTGATGTCAAATAAGT-TCTTCACACATGCCTCGCCCACTTTGTT 2813 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||||||||| || || || ||| |||| ||||||||| ||| || |||||||| Sbjct 2812 CAATGCTGGCACGCCTCAGCCCCAGTTGTCATCATGCTTCCTTGTCGACATGAAGGAGGA 2753 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | ||| | || || || | || || | | ||||| ||||| ||| ||| || Sbjct 2752 CAGCATCGAGGGCATTTACGACACCCTCAAGACTTGTGCTATGATCTCCAAGATGGCGGG 2693 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACA 75508 ||||| || || || | || | | |||| ||| || ||| || || Sbjct 2692 TGGTATCGGTCTGAACGTGCACCGCATCCGTGCCACCGG--CTCATACATCGCTGGCACT 2635 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 || || ||| |||| || | |||||||| || || || ||| ||| || || || Sbjct 2634 AACGGCACATCTAATGGCATCACACCAATGCTGCGGGTCTTCAACAACACCGCCCGATAC 2575 Query 75569 GTAAATCAAGCGGGGCGTCGCAAGGGGTCCA-------TCGCGGTCTACTTGGAACCATG 75621 || |||| ||||| | | | |||| | || ||||| | || ||||| Sbjct 2574 GTCGATCA----GGGCGGCAATAAGCGTCCTGGTGCTTTTGCTATCTACCTTGAGCCATG 2519 Query 75622 GCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCG 75681 ||| || ||| || | ||||||||||| | || ||||| || | || ||| || Sbjct 2518 GCACGCTGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGATCCG 2459 Query 75682 GTGTAGAGATCTCTTTTCAT-CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGG 75740 | ||||| ||| | | |||| ||||| || || ||||||||||||||||| ||| Sbjct 2458 AGCCCGTGATCT-TTTCCTTGCCCTCTGGATCCCCGATCTTTTCATGAAGCGGGTCGAGA 2400 Query 75741 AGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGG 75800 || ||| | ||| | || | ||||| || || || || ||| ||||| | Sbjct 2399 AGAACGGTGACTGGACCCTGATGTGTCCTAACGAGTGTCCTGGCCTCGCCGACTGCTACG 2340 Query 75801 GTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CAATGCGA 75857 | || ||||| || || |||||| |||| || ||||||| ||| ||| | | Sbjct 2339 GCGATGAGTTCGAGGCTCTCTACGAGCAGTACGAGAAGGAGGGCCGAGGTCGCAAGACCA 2280 Query 75858 CTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916 || | ||| | || | | ||| | ||||||||| || | ||||| |||||||| | Sbjct 2279 -TGAAG--GCC-CAGAAGCTGTGGTATGCTATTCTCGAAGCTCAGACCGAGACTGGCAAC 2224 Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976 || | ||||| || ||||| ||| ||||| ||||| ||||| |||| || Sbjct 2223 CCCTTCATGCTGTATAAGGACCACGCAAACCGCAAGAGCAACCAGAAGAACCTGGGTACC 2164 Query 75977 ATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCT 76036 || ||||| || || ||||| || || | |||||| | ||| ||| || Sbjct 2163 ATTCGAAGCTCCAACCTCTGCACAGAGATCATCGAGTACTGTGCACCGGACGAGGTCGCC 2104 Query 76037 GTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGA-GACTCGCACTTT 76095 || ||||| ||||| || || || || || || || ||| | ||| ||| Sbjct 2103 GTGTGCAACTTGGCCTCCATTGCTCTACCTGCATACGT---TGACTACGACAACAACTGC 2047 Query 76096 TG--ATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTC 76153 | | | | | | || || | || || | | | || || ||| || Sbjct 2046 TACAACTTCCAGCAGTTGCACGAGGTTACCCAGGTCATCGTCCGCAACCTGAACAAGATC 1987 Query 76154 ATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCT 76213 ||||| ||| ||||| || || || || || ||||||||| | ||| Sbjct 1986 ATTGATGTCAATCACTATCCGGTCAAGGAGGCCTATAACAGCAACATGCGACACCGGCCT 1927 Query 76214 ATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCAT----- 76268 |||||| | |||||||| ||||| || || | ||| ||| ||| || ||||| Sbjct 1926 ATTGGTGTCGGTGTTCAGGGTCTTGCTGACGCATTC---TTG-GCC-CTTCGCATGCCTT 1872 Query 76269 TTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328 | || || || || ||| | ||| | ||||| || ||||| || || || Sbjct 1871 TCGACTCTCCAGAGGCTCGCGAGCTAAATAAGCAGATCTTCGAGACCATCTACCATGCTG 1812 Query 76329 CCCTGGAGGCGAGTTGTGA-ATTGGCTGAAGCCCAAGGTTCC-TATGAGACATTTGAGGG 76386 | || || |||| |||| | ||| ||| || || |||||| ||||| Sbjct 1811 CTCTCACTGCATCAAGTGATATTGCC--AAGGTGGAGGGCCCATACAAGACATACGAGGG 1754 Query 76387 TTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT-CA 76445 || | || || || | || |||||||| |||||| || || || || | | Sbjct 1753 CAGCCCAGTCTCACAGGGCATCCTGCAGTTTGACATGTGG-AATGTCAAGCCTTCCGACC 1695 Query 76446 ACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT 76505 | |||||||||| |||||||| |||||||||| ||| | || |||||| | | Sbjct 1694 TTTGGGACTGGGATGCGCTCAAGGACAAGATCAAGGAGACTGGTGTACGCAACAGTTTGT 1635 Query 76506 TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 76565 || ||||||||||||| || || || || | || ||| ||||||| ||||| ||||| | Sbjct 1634 TGCTGGCACCAATGCCCACTGCTTCGACGTCGCAGATCCTGGGTAACAATGAGTGCTTCG 1575 Query 76566 AACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCA 76625 | |||||||| | |||||||||| | || | ||||| || ||||| | |||| Sbjct 1574 AGCCATACACCTCCAACATCTACCAGCGACGTGTGCTCGCTGGCGAGTTCCAGGTCGTCA 1515 Query 76626 ACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATC 76685 || | || ||| || || | || |||| | ||||| ||| |||||| | | Sbjct 1514 ACCCGTGGCTTCTCAGGGATCTGACAGAGCTTGGCTTGTGGTCTGAGGCCATGAAGAACC 1455 Query 76686 TCATGGTGAAAGCGGGTGGTTCCATTCAAAATA-TCTCAGATATCCCAGATGATATCAAG 76744 || | | || ||||||||| || | | || ||| ||||| | |||||||||| Sbjct 1454 GTATTATCGCCGAGGATGGTTCCATCCAGAGCATTCCCAG-CATCCCGGCTGATATCAAG 1396 Query 76745 AATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATG-TCATTG---ACATGGCCGC 76800 || ||| || || ||||| ||| | ||| | ||||| | ||| | || Sbjct 1395 GCCCTTTACAAGACCGTCTGGGAGATC----TCTCAGAGGACCATTGTGCAGATGTCTGC 1340 Query 76801 AGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATG-GAAAGTCCAA 76859 || |||||| ||| ||||| || ||| | |||| | |||| | || ||| Sbjct 1339 TGACCGTGGTGCCTTTATTGACCAGTCTCAGTCTCTGAACATCCACATGCGGGAG-CCAT 1281 Query 76860 CGATGTCCAAGCTCTCTTCTATGCATATGTACGCG---TGGAAACAGGGGCTCAAAACCG 76916 | ||| |||| || | |||||| | |||| ||||| | || ||||| || | Sbjct 1280 CCATGGGCAAGATCACCAGTATGCA---CTTCGCGGGCTGGAAGCTCGGTCTCAAGACTG 1224 Query 76917 GAATGTACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964 | |||||||| ||||| | |||| ||| ||| || ||||||| Sbjct 1223 GCATGTACTACCTCCGCACTCAGGCAGCTGCCGCACCCATCCAGTTCA 1176 >seq12282 Length=8984 Score = 102 bits (112), Expect = 1e-16 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 65074 GCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC 65133 ||| |||| || |||| || || |||||||| ||||||||| ||| ||||| | Sbjct 7617 GCCCAGCGACTGGTTGCCTTCGCTGCCGTGGAGGGCATCTTCTTCAGCGGCGCATTCGCC 7676 Query 65134 GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTT 65193 | |||| ||| | |||||||| ||||||||||| ||||| |||||| || || || Sbjct 7677 TCCATTTTCTGGCTCAAGAAGCGCGGTCTCATGCCTGGCCTGACCTTCTCCAACGAGCTA 7736 Query 65194 ATTTCCCGAGATGAGGGTCTCCAC 65217 ||||| || ||||||||||| ||| Sbjct 7737 ATTTCTCGTGATGAGGGTCTGCAC 7760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596469808820160