Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq4614 264 1e-65 seq11228 194 2e-44 seq4985 109 7e-19 seq10075 100 4e-16 seq9008 95.1 2e-14 seq3389 93.3 6e-14 seq7991 89.7 7e-13 >seq4614 Length=12099 Score = 264 bits (292), Expect = 1e-65 Identities = 480/699 (69%), Gaps = 5/699 (1%) Strand=Plus/Plus Query 195290 ATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAA 195349 ||| ||| ||| ||||||| ||||| || || || ||||| ||||| ||| | | | Sbjct 10759 ATGGCTCCCGCTGTTGGTATTGATTTGGGTACAACCTACTCTTGTGTGGGTATTTTCCGT 10818 Query 195350 AATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTT 195409 |||| || | ||||| || | || |||||||||||||| || || || || | ||| Sbjct 10819 GATGACCGCATTGAGATCATTGCCAACGACCAAGGAAACCGGACCACCCCTTCCTTCGTC 10878 Query 195410 GCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAAC 195469 || || || || | || ||||| | |||||||| || || || ||| || |||||| Sbjct 10879 GCTTTCACCGACACCGAGCGTCTGATCGGAGATGCGGCCAAGAACCAGGTCGCCATGAAC 10938 Query 195470 CCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAA 195529 || ||| || ||||| || |||||||| | ||||| |||||||| ||| | Sbjct 10939 CCCCACAACACCGTCTTCGATGCGAAGCGGTTGATTGGCCGCAAGTTCCAGGACTCTGAG 10998 Query 195530 GTCCAAGACGATATAAAGGACTGGTCTTATGAAG-TTGTTCCCGGTGTGGCTGATAAGCC 195588 ||||| | ||| || ||| ||| | | | ||| |||| || || || ||||| Sbjct 10999 GTCCAGGCCGACATGAAGCACTTCCCCT-TCAAGATTGT---CGAGAAGGGTGGCAAGCC 11054 Query 195589 TATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTC 195648 | || | ||||| || | || ||| || || | || || || || || || Sbjct 11055 CAACATCGAGGTTGAGTTCAAGGGCGAGTCCAAGATCTTCACCCCAGAGGAGATCTCCTC 11114 Query 195649 TATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGA 195708 ||||| | | |||||| ||||| || || |||| | ||||| || || || | Sbjct 11115 CATGGTCCTCACCAAGATGCGTGAGACCGCCGAGTCTTACCTGGGTGGCACCGTCAACAA 11174 Query 195709 TGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGC 195768 || || | ||||| || || || |||| || || || || || || || ||||| || Sbjct 11175 CGCCGTCATCACTGTTCCCGCCTATTTCAACGACTCTCAGCGTCAAGCAACCAAGGATGC 11234 Query 195769 TGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAAT 195828 || | |||||| || || || ||| | || |||||||||||||| || || || || Sbjct 11235 TGGTCTTATTGCCGGCCTGAATGTTCTGCGTATCATCAATGAACCAACCGCCGCCGCCAT 11294 Query 195829 TGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGG 195888 |||||||||||| |||||||| || | || || || ||||||| || || || Sbjct 11295 TGCTTATGGTCTCGACAAGAAGGTCGAGGGCGAGCGCAACGTCCTGATCTTCGACCTGGG 11354 Query 195889 TGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGC 195948 |||||||| || |||||||| || || | || || | ||||| ||||| || ||| | Sbjct 11355 CGGTGGTACTTTCGATGTCTCGCTCCTGACCATCGAGGAGGGTATCTTCGAGGTCAAGTC 11414 Query 195949 TACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| ||||| ||||| || |||||||| || || || Sbjct 11415 CACTGCCGGTGACACTCACCTGGGTGGTGAGGACTTTGA 11453 >seq11228 Length=3802 Score = 194 bits (214), Expect = 2e-44 Identities = 179/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| |||||||| || ||| | || ||||| || ||||| || || || ||||| ||| Sbjct 147 ATGCAGATCTTTGTCAAGACCTTGACGGGAAAGACGATCACTCTTGAAGTCGAGTCATCA 206 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||||||||| ||| |||| | |||||||| || ||||| ||||| ||||| || ||| Sbjct 207 GACACAATCGACAACGTCAAGTCTAAGATTCAGGACAAGGAGGGCATCCCACCAGACCAG 266 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| |||||||| ||||| || ||| | |||||||| || || || |||| |||||| Sbjct 267 CAACGTCTTATTTTCGCTGGCAAGCAGTTGGAAGATGGCCGGACACTGTCTGACTACAAC 326 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | ||||||||||| || || ||| | || || | || |||||||| Sbjct 327 ATCCAAAAGGAGTCGACGCTGCACTTGGTGCTTCGTCTGCGGGGTGG 373 >seq4985 Length=7965 Score = 109 bits (120), Expect = 7e-19 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 171938 TCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTG 171997 |||| ||||||| || || |||||||||||||| || || ||||| || || || || | Sbjct 7962 TCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAGCAGCGTCTGATCTTCG 7903 Query 171998 CTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTA 172057 | || || ||||| || || || || |||||| | || |||||| | || |||||||| | Sbjct 7902 CCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCA 7843 Query 172058 CTCTACACCTTGTTCTAAGGCTTCGGGGTGGTG 172090 | || ||||| || || | || || ||||||| Sbjct 7842 CCCTCCACCTGGTGCTGCGCCTGCGTGGTGGTG 7810 >seq10075 Length=7627 Score = 100 bits (110), Expect = 4e-16 Identities = 247/375 (66%), Gaps = 0/375 (0%) Strand=Plus/Minus Query 196503 CGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAAC 196562 |||| ||||| ||||| || | ||| | ||||| |||| || ||| ||| | Sbjct 4525 CGGGAGGTGTCATGACCAAGCTGATTCCGCGCAACACTCCTATCCCCACTCGCAAGAGCC 4466 Query 196563 AAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAG 196622 | |||| || || ||||||| || || | || | ||||| || | ||||| | Sbjct 4465 AGATCTTCTCCACTGCGGCCGATAACCAGCCCGTCGTCCTGATTCAGGTGTTCGAAGGCG 4406 Query 196623 AACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAG 196682 | || || | ||||| ||| | || || || | || || |||| || ||||| Sbjct 4405 AGCGATCTATGACCAAGGACAACAACCTCCTCGGCAAGTTTGAGCTGACTGGAATTCCCC 4346 Query 196683 CTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTC 196742 | || ||| | || || |||||| | || | ||||| | ||||| || ||||||| Sbjct 4345 CGGCGCCCCGTGGCCAGCCCCAGATTGAGGTCTCTTTCGAGCTGGACGCCAACGGAATTC 4286 Query 196743 TAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATG 196802 | || || | || | ||||||| ||||||| || ||| || ||||||| Sbjct 4285 TGAAGGTTTCGGCCGTCGACAAGGGAACTGGCAAGGGCGAGTCCATTACCATCACCAATG 4226 Query 196803 ACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACA 196862 ||||||| || || | ||||||||||||| || |||||| || || || |||||| Sbjct 4225 ACAAGGGCCGTCTGACCCAGGAGGAAATTGAGCGCATGGTTGCCGAGGCTGAGAAGTACG 4166 Query 196863 GGGAAGAAGACGAGG 196877 || || ||| ||| Sbjct 4165 CCGAGGAGGACAAGG 4151 Score = 96.9 bits (106), Expect = 5e-15 Identities = 188/278 (68%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 || ||||| || || || || ||||| | || || || ||||| || ||||| || Sbjct 5312 GCCGTTGTTACCGTCCCCGCCTACTTTAACGACAACCAGCGCCAGGCTACCAAGGATGCC 5253 Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829 | || || ||||| ||| || | ||| | || || |||||||| || || || Sbjct 5252 GGCATCATCGCCGGTCTCAACGTCCTCCGCATTGTAAACGAGCCAACAGCCGCCGCCATC 5193 Query 195830 GCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 || || ||||||||||||| | |||| | || | | | ||| ||||| ||| Sbjct 5192 GCATACGGTCTGGACAAGACCGAGGAGGGCGAGCGTCAGATCATCGTCTACGATCTTGGT 5133 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 |||||||| || ||||| || || || ||| || || | || || || ||| Sbjct 5132 GGTGGTACTTTCGATGTGTCCCTGCTTTCTATCGACCAGGGCGTCTTTGAGGTCCTAGCT 5073 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || || |||||||| ||||| |||||||| || ||||| Sbjct 5072 ACCGCCGGTGATACCCATCTTGGTGGTGAGGACTTCGA 5035 >seq9008 Length=1807 Score = 95.1 bits (104), Expect = 2e-14 Identities = 217/327 (66%), Gaps = 6/327 (2%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||||||||| || | | | | | || | || || | || || |||||| Sbjct 920 AAGATGAAGGAGACTGCCGAGGCCTACCTCAGCAAGCCCGTCAAGAACGCTGTCGTGACT 979 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||| ||||||| || || || || ||||| || ||||| || | | ||| | Sbjct 980 GTCCCTGCCTACTTCAACGACTCCCAGCGTCAGGCCACCAAGGATGCCGGTCAAATTTCT 1039 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| ||| || | | |||| || || || || || || | || || |||||| Sbjct 1040 GGTCTGAACGTCCTCCGTGTCGTCAACGAGCCTACTGCTGCCGCCCTGGCCTACGGTCTG 1099 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 || ||| || | || | ||| ||| ||||| ||||||||||| || Sbjct 1100 GAGAAG------GAGGCTGACCGCATTGTCGCTGTCTACGATCTGGGTGGTGGTACTTTC 1153 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 ||| |||| | || | || | | || | ||||| || ||| |||| ||||| Sbjct 1154 GATATCTCGGTCCTTGAGATCCAGAGCGGCGTCTTCGAGGTCAAGTCTACCAACGGTGAC 1213 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGAT 195988 || || || |||||||| || |||||| Sbjct 1214 ACCCACCTCGGTGGTGAGGACTTCGAT 1240 >seq3389 Length=5885 Score = 93.3 bits (102), Expect = 6e-14 Identities = 200/296 (68%), Gaps = 5/296 (2%) Strand=Plus/Minus Query 195663 AGATGAAGGAGACTGCGGA-ATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 |||||||||||| ||| || ||| | |||| || | || | | || || | || Sbjct 4630 AGATGAAGGAGATTGCAGAGATCAAGC-TGGGCAAGAAGGTTGAGAAGGCTGTCATCACA 4572 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||| ||||||| || || || ||||| || |||||||| | | | || | Sbjct 4571 GTCCCTGCCTACTTCAACGACAACCAGCGTCAGGCCACCAAGGACGCCGGTTCCATCTCC 4512 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| ||| || | || ||||| || || || || || || |||||||| ||||| Sbjct 4511 GGTCTCAACGTCCTCCGTATCATCAACGAGCCCACCGCTGCCGCCATTGCTTACGGTCTC 4452 Query 195842 GACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACG 195898 | | |||||| || | || || || |||||| |||||| ||||| ||||| Sbjct 4451 GGCTCCAACAAGTCCAACAAGGAGCGCAACGTCCTGATCTATGATCTTGGTGGCGGTACT 4392 Query 195899 TTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGC 195954 || ||||| || || || | ||||| || | | ||| || |||||||| || Sbjct 4391 TTCGATGTGTCTCTGCTGCACATTGAGGGAACTGTCTTCACGGTCAAGGCTACGGC 4336 >seq7991 Length=9451 Score = 89.7 bits (98), Expect = 7e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 79256 GCACCAATGCCCACTGCTTCGACGGCTCAGATCCTCGGTAATAATGAGTGTTTTGAACCA 79315 |||||||||||||||||||||||| | |||||||| ||||| |||||||| || || ||| Sbjct 1629 GCACCAATGCCCACTGCTTCGACGTCGCAGATCCTGGGTAACAATGAGTGCTTCGAGCCA 1570 Query 79316 TACACTACAAACATATA 79332 ||||| | ||||| || Sbjct 1569 TACACCTCCAACATCTA 1553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657752356067040