Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq4277 134 4e-26 seq1823 118 3e-21 seq12282 105 2e-17 >seq4277 Length=7710 Score = 134 bits (148), Expect = 4e-26 Identities = 199/282 (71%), Gaps = 0/282 (0%) Strand=Plus/Minus Query 302583 CTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAG 302642 ||||| || || ||||| |||||||||||| || || || ||||| ||||| || | Sbjct 3544 CTTGACTAGTCGGCGCTGGATATAACCAGTTTCAGCGGTCTTGACAGCGGTATCTATCAA 3485 Query 302643 ACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAA 302702 ||| |||||||| |||| || |||||||| | ||| |||| || || | | | Sbjct 3484 ACCCTCACGACCAGCCATGGCGTGGAAGAAGAACTCGGTCGGTGTCAGACCACGCAGGTA 3425 Query 302703 GGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAG 302762 || |||| ||||| ||||| ||||||||||| | |||| ||| |||||||| ||||| Sbjct 3424 AGAATTCTCGACGAAGCCACGGGCCTCGGGCGAGTAGTCGTCCTTCGTAAAGTGAGGCAG 3365 Query 302763 GGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCA 302822 |||| || || | || |||| || | |||||| |||||| ||| || || | Sbjct 3364 TGTCCGGTACTTGAATCCAAATGGAATCCTCTTTCCCTCAACGACCTGTTGGCCGACCAG 3305 Query 302823 CGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCC 302864 | | ||||||| || || || | | | |||||||| || Sbjct 3304 AGCAGTCATCTGAGAGATGTTAATAGAAGAACCCTTGGAACC 3263 >seq1823 Length=12312 Score = 118 bits (130), Expect = 3e-21 Identities = 395/600 (66%), Gaps = 26/600 (4%) Strand=Plus/Minus Query 251402 AGGCG--ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATA 251459 ||||| || || ||||| | | ||| | ||||| ||| | ||||| || | ||| | Sbjct 10011 AGGCGTCATGAGCCCACAGATCTCACAGATGTGGACTCTGAACGCATCGGACACCTCAAA 9952 Query 251460 TAGCCGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTC 251519 | || |||| |||| || || || || | ||||||||||||||| |||||||| Sbjct 9951 CAAACGCTCCTTCAGGAAGGCAGCAGCTCCATGGGCAATCATACAATCACGTTCCATTTC 9892 Query 251520 ACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGA-GATTAA 251578 |||||||| || |||||||| | || | ||| || | || || || || | |||| Sbjct 9891 TCCGAAACGCAGGCCACCATCTCTGGCACGACCTTCCACGGGTTGCCGCGTCATGATTTG 9832 Query 251579 CCATAGGACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGT 251638 | | |||||| || ||| || ||| || | ||||| || |||||||||| Sbjct 9831 C-ACAGGACCACGGGCACGGGCGTGAATCTTGTCGTCCACCATGTGGCGAAGACGCTGGT 9773 Query 251639 AGAATGCGGGACCGATGAAGA--TG---CTCGAAGGCATTTGCTCTCCAGTTAGAGCGTT 251693 || ||| ||| |||| ||||| || || || || |||| | || || | |||| Sbjct 9772 AGTATGTGGGCCCGAAGAAGACCTGGGCCTTGA--GC--TTGCGCCCC-GTGTGCCCGTT 9718 Query 251694 ATACATAACTTCGTTTCCATTAGATTCATAACCAAGTTTCTGTAGC---TCTGAAGCAAT 251750 || | || || ||| |||| || ||| || || ||| || || || Sbjct 9717 GTAGAGGACCTCAAAGCCACGTGATTGGTACCCATGTGCATGAAGCAGATCAGAGACAGA 9658 Query 251751 ATCACCAATCTTGAATTTGCTAAAACTGGTGCCGTCTCCGTAAAGACCCATTTGAA--TC 251808 || || | || | | ||| || |||| || | | ||| || || || Sbjct 9657 GTCGACAGT---GACGTCAGTGAAAGGCGTCGCGTCGCCTTCCATGCCC--TTCAAGGTC 9603 Query 251809 AACACTTTGCCTAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCA 251868 |||| ||| ||| || ||| ||| ||||| || |||||||| ||||| ||| Sbjct 9602 GACACCTTGGATAAGAGACACTCGATCAAATGGGCAATTGTCATACGCGACGGAATGGCA 9543 Query 251869 TGGGGATTGATGATGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCC 251928 ||||| |||||||| ||||||||| | | || || | |||| ||||| || | || Sbjct 9542 TGGGGGTTGATGATAATGTCGGGTGTAACACCCTCGCGACTGAACGGCATGTCTTCTTGA 9483 Query 251929 TCAATAA-TGTTTCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 | ||| || || ||||| |||||||| |||||||||||| ||||| |||||||| Sbjct 9482 -CGGTAAGTGACACCGATAGTGCCCTTTTGACCGTGACGAGAAGCAAACTTGTCACCAAT 9424 >seq12282 Length=8984 Score = 105 bits (116), Expect = 2e-17 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133451 AAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTG-CGAGTTTTGCTACTCG 133509 ||||| | ||||||||| | || |||||||||||| ||| | | | | ||| || Sbjct 7566 AAGAAGGCCGACTGGGCTCTGAAGTGGATCCAGGAC-CGCGAGTCCACCTATGCCCAGCG 7624 Query 133510 TCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTT 133569 || ||||| || |||| || |||||||| || ||||| || || ||| ||| ||||| Sbjct 7625 ACTGGTTGCCTTCGCTGCCGTGGAGGGCATCTTCTTCAGCGGCGCATTCGCCTCCATTTT 7684 Query 133570 TTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAG 133629 ||||| || ||||| ||| | | ||||| ||| || || ||||| || ||||| | Sbjct 7685 CTGGCTCAAGAAGCGCGGTCTCATGCCTGGCCTGACCTTCTCCAACGAGCTAATTTCTCG 7744 Query 133630 GGACGAGGCACTTCACACCGAATTTGC 133656 || |||| || |||||||| || || Sbjct 7745 TGATGAGGGTCTGCACACCGACTTCGC 7771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471565246753734