Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq7991 149 6e-31 seq11228 105 6e-18 >seq7991 Length=9451 Score = 149 bits (164), Expect = 6e-31 Identities = 417/630 (66%), Gaps = 15/630 (2%) Strand=Plus/Plus Query 139302 CTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACA 139361 |||||||| |||||||| | ||||| || |||||| ||| | || | |||| Sbjct 2305 CTCGTACTGCTCGTAGAGAGCCTCGAACTCATCGCCGTAGCAGTCGGCGAGGCCAGGACA 2364 Query 139362 CTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATC 139421 || || ||||||||| || | ||| | |||||| || ||| ||| ||||||| ||||| Sbjct 2365 CTCGTTAGGACACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAAAAGATC 2424 Query 139422 CGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTC-CGAACCCATGTTAC 139480 || ||||| | || | | | ||| || || || |||| | | || || | | Sbjct 2425 GGGGATCCAGAGGGCAAGGAAAAGATCACGGGC--TCGGATCTCCTCCTTGCCGTGGTTC 2482 Query 139481 GTTT-CATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATT 139539 | || || |||||| ||||| || |||||||||||||| || || ||||| || | Sbjct 2483 TTGCGCAGGTCAAGGAACTCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAA 2542 Query 139540 GCGCCTTTCCGTTT---GCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGC 139596 || || || || ||| || |||||||||| ||| | | || ||||| || ||| Sbjct 2543 GCACCAGGACGCTTATTGCCGCCCTGATCGACGTATCGGGCGGTGTTGTTGAAGACCCGC 2602 Query 139597 AACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATGG--GA-CTGTTGCGA 139653 | ||| || | || | | ||| ||||| |||| | |||| || | | || Sbjct 2603 AGCATTGGTGTGATGCCATTAGATGTGCCGTTAGTGCCAGCGATGTATGAGCCGGTG--- 2659 Query 139654 GCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA 139713 || |||| | || || || | ||||| || || | | ||||| || | | | ||| Sbjct 2660 GCACGGATGCGGTGCACGTTCAGACCGATACCACCCGCCATCTTGGAGATCATAGCACAA 2719 Query 139714 -TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCA 139772 || | | || ||||| || || |||||||| |||| ||| ||| || ||||| Sbjct 2720 GTCTTG-AGGGTGTCGTAAATGCCCTCGATGCTGTCCTCCTTCATGTCGACAAGGAAGCA 2778 Query 139773 TGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA 139832 ||| || | || || | |||||| || |||| ||| || || || ||||| Sbjct 2779 TGATGACAACTGGGGCTGAGGCGTGCCAGCATTGAACAAAGTGGGCGAGGCATGTGTGAA 2838 Query 139833 CATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGAT 139892 | | || ||||||| | ||| || |||||| | ||| | | ||| ||| ||| Sbjct 2839 GAACTTATTTGACATCAGGTTGTAGGTCTCGATGACCCTCTCGACATCGTCTCCCCAGAT 2898 Query 139893 ACCGACAGAGACTCGCATCAGCATATGTTG 139922 |||||||| ||| ||||| | ||| ||||| Sbjct 2899 ACCGACAGCGACACGCATGATCATGTGTTG 2928 >seq11228 Length=3802 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | || || || || || || || ||||| || | | Sbjct 147 ATGCAGATCTTTGTCAAGACCTTGACGGGAAAGACGATCACTCTTGAAGTCGAGTCATCA 206 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || ||||| || ||||| || || || || || || || Sbjct 207 GACACAATCGACAACGTCAAGTCTAAGATTCAGGACAAGGAGGGCATCCCACCAGACCAG 266 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT-TCGAGAAACATGTCAGATTATAA 24882 |||||| | || || || || || ||| |||| ||| | || || |||| || || || Sbjct 267 CAACGTCTTATTTTCGCTGGCAAGCAGTTGGAAGATGGCCGGACAC-TGTCTGACTACAA 325 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 ||| |||||||| ||||| || ||||||||| | || |||| || |||| Sbjct 326 CATCCAAAAGGAGTCGACGCTGCACTTGGTGCTTCGTCTGCGGGGTGGCG 375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449822343378960