Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1846 185 1e-40 seq12282 120 5e-21 seq7991 109 9e-18 seq10567 107 3e-17 seq6794 104 4e-16 seq4356 95.1 2e-13 seq5060 87.8 3e-11 >seq1846 Length=19237 Score = 185 bits (204), Expect = 1e-40 Identities = 310/444 (70%), Gaps = 12/444 (3%) Strand=Plus/Plus Query 2019003 GACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGCCCGGCACGGGCAAGACCACGAGC 2019062 || ||||||||||| || || | | ||| ||| || | || |||||||| ||| Sbjct 5254 GATGGCAACATGCCGCACGTCATCATCAGCGGCATGCCAGGTATCGGAAAGACCACCAGC 5313 Query 2019063 ATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTC 2019122 | |||||||||||| ||| |||||| ||| | | ||||| ||||| || ||| Sbjct 5314 GTACTCTGCCTGGCGCGCCAGCTGCTGGGCGACGCCTACAAGGAGGCGGTGCTGGAGCTC 5373 Query 2019123 AATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATC--ATCAAG--CATCACGC 2019178 || || || |||||||| || | || || ||||| ||| | |||||| | || ||| Sbjct 5374 AACGCCTCGGACGAGCGAGGAATCGATGTGGTGCG--GAACCGGATCAAGGGCTTCGCGC 5431 Query 2019179 TTCGAAAAGAA--TCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCC 2019236 | ||||| || |||||| | |||||||||||| | ||||||| || |||||| Sbjct 5432 ----AGAAGAAGGTCACGCTGCCGGCGGGCCGCCACAAGATCGTCATCCTGGACGAGGCC 5487 Query 2019237 GACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAAC 2019296 ||| || | ||||||| || |||||||| || | ||| ||||| | ||| ||||| Sbjct 5488 GACAGCATGACGTCGGGCGCGCAGCAGGCGCTGAGGCGGACGATGGAGATTTACTCCAAC 5547 Query 2019297 ACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGC 2019356 |||||||||||||| | || |||||| ||| | | ||||||| | || ||| Sbjct 5548 ACGACGCGGTTTGCCTTCGCGTGCAACCAGTCCAACAAGATCATCGAGCCGCTGCAGTCG 5607 Query 2019357 CGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGC 2019416 || || || ||| |||| | ||||| || || |||| |||| | | | ||| ||| Sbjct 5608 CGGTGTGCGATCCTGCGGTACGCGCGGCTGACGGACGGCCAGGTGGTCAAGCGCCTGATG 5667 Query 2019417 GAGATTATCGACGCCGAAAAGGTC 2019440 | || ||||| ||||| || ||| Sbjct 5668 CAAATCATCGAGGCCGAGAAAGTC 5691 >seq12282 Length=8984 Score = 120 bits (132), Expect = 5e-21 Identities = 180/253 (71%), Gaps = 6/253 (2%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| ||| || |||||||||||||| ||| Sbjct 8076 TGACACCGGCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGA 8017 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTC---GCACC 794007 | ||||| |||||| | ||| ||||| | | | ||| |||||| || || Sbjct 8016 GAGAGATGTTCTCCATGAAGTCGAAGGGGTTTGATGACTTGTAAACCTTCTCATTGC-CC 7958 Query 794008 CGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGT 794067 ||||||| || || |||||||| || || || |||||||| ||||||| || || Sbjct 7957 AGAGCGACC--AGTAGACGGTCGGCAACAAACTCGATGTACTGTTTCATGAGGTTGGAGT 7900 Query 794068 TCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGG 794127 ||||||||| ||| || ||||| | |||| | | ||||| |||||||| | || | Sbjct 7899 TCATGCCGAGGAGGGCGCATGGCAGAGCCTCGGTCAAGAACTCCTTCTCGATGGCAACAG 7840 Query 794128 CCTCGATGATGAT 794140 ||||| ||||||| Sbjct 7839 CCTCGGTGATGAT 7827 Score = 93.3 bits (102), Expect = 7e-13 Identities = 114/155 (74%), Gaps = 3/155 (2%) Strand=Plus/Minus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436 ||||| |||||||| ||||||||||||||||| || |||| ||| ||| ||| Sbjct 7717 AGGCCAGGCATGAGACCGCGCTTCTTGAGCCAGAAAATGGAGGCGAATGCGCCGCTGAAG 7658 Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT 794496 ||||||||||| ||||| || ||| | || || |||| |||| | ||| | || || Sbjct 7657 AAGATGCCCTCCACGGCAGCGAAGGCAACCAGTCGCTGGGCATAGGTGGACTCGCGGTC- 7599 Query 794497 TTGTTGATCCACTTCATCGCCCACTCTGCCTTTTT 794531 | ||||||||||| ||||| || ||||| || Sbjct 7598 --CTGGATCCACTTCAGAGCCCAGTCGGCCTTCTT 7566 Score = 91.5 bits (100), Expect = 2e-12 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643 || ||||||| ||||||||||||||| |||||||| ||||| ||||||||||| || || Sbjct 7455 GGCTCCTTGATGTAGGTGTCGATGAGCAGCGAGTACGTCTCGGAGTGGATGTTCTCCATC 7396 Query 794644 GCGATCTGGAAGCCATAAAAGCA 794666 ||||||||| || || ||||| Sbjct 7395 ATGATCTGGAATCCGTAGAAGCA 7373 >seq7991 Length=9451 Score = 109 bits (120), Expect = 9e-18 Identities = 182/263 (69%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596 || ||| ||||| || || || |||| ||| ||||| || ||||| || | ||| || Sbjct 2563 GCCCTGATCGACGTATCGGGCGGTGTTGTTGAAGACCCGCAGCATTGGTGTGATGCCATT 2622 Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656 || |||||| ||||| || | ||| | ||| | ||| || | |||| || | Sbjct 2623 AGATGTGCCGTTAGTGCCAGCGATGTATGAGCCGGTGGCACGGATGCGGTGCACGTTCAG 2682 Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716 ||||| || || ||| ||||||||| | || || | || || || ||||| ||||| Sbjct 2683 ACCGATACCACCCGCCATCTTGGAGATCATAGCACAAGTCTTGAGGGTGTCGTAAATGCC 2742 Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776 |||||| ||| |||||||||| | || ||||| || || || || | | ||| Sbjct 2743 CTCGATGCTGTCCTCCTTCATGTCGACAAGGAAGCATGATGACAACTGGGGCTGAGGCGT 2802 Query 2073777 GCCGGCATTGAAGAGCGTGGGCG 2073799 ||| |||||||| | ||||||| Sbjct 2803 GCCAGCATTGAACAAAGTGGGCG 2825 Score = 96.9 bits (106), Expect = 5e-14 Identities = 287/444 (65%), Gaps = 10/444 (2%) Strand=Plus/Plus Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTT 2071631 ||| || || ||| ||||| ||||||| | ||| |||| |||||||||| |||||| Sbjct 2127 ACTCGATGATCTCTGTGCAGAGGTTGGAG--CTTCGAATGGTACCCAGGTTCTTCTGGTT 2184 Query 2071632 GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGC 2071691 ||| | |||| || |||||| | ||||||| |||| || |||||| |||| || Sbjct 2185 GCTCTTGCGGTTTGCGTGGTCCTTATACAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGC 2244 Query 2071692 CGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCT-CG--CGCGGCCCTN 2071748 || || || |||| | | | || || |||| | || | ||||||| Sbjct 2245 TTCGAGAATAGCATACCACAGCTTCTGGGCCTTCAT---GGTCTTGCGACCTCGGCCCTC 2301 Query 2071749 NNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGG 2071808 |||| || || || | |||||| ||| ||| ||||| || Sbjct 2302 CTTCTCGTACTGCTCGTAGAGAGCCTCGAACTCATCGCCGTAGCAGTCGGCGAGGCCAGG 2361 Query 2071809 CGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAG 2071868 |||| || || | || | |||||| ||| || | || || ||| || || Sbjct 2362 ACACTCGTTAGGACACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAAAAG 2421 Query 2071869 GTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTT 2071928 ||| |||| ||| | || ||||| || || ||| ||||||||||||||||||| Sbjct 2422 ATCGGGGATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTGCCGTGGTT 2481 Query 2071929 CTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAA 2071988 ||| |||||| || | || | || || |||||||| ||||| |||||| ||||| Sbjct 2482 CTTGCGCAGGTCAAGGAACTCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAA 2541 Query 2071989 GGCGCCCTTGCGCTTGCCGCCGCC 2072012 || || ||||| |||||| Sbjct 2542 AGCACCAGGACGCTTATTGCCGCC 2565 >seq10567 Length=8101 Score = 107 bits (118), Expect = 3e-17 Identities = 100/127 (79%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688 ||||| ||| | || || || ||||||||| | || |||||| | || || ||| | || Sbjct 6614 CTCTTCGAGATCATTCTTGCTGCCAACTACATGGATATCAAGGCGCTGCTTGATGTTGGT 6555 Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748 |||||||| || |||||| | ||||||||||| || || ||||| || |||||||| || Sbjct 6554 TGCAAGACAGTAGCCAACATGATCAAGGGCAAATCCCCTGAGGAGATTCGCAAGACGTTC 6495 Query 2035749 AACATCA 2035755 ||||||| Sbjct 6494 AACATCA 6488 >seq6794 Length=11376 Score = 104 bits (114), Expect = 4e-16 Identities = 213/312 (68%), Gaps = 10/312 (3%) Strand=Plus/Plus Query 2411351 TCTTGGCGCGGATGACCTCGTCGCAATCGTCGAGATCAATCTTGGAGGCGGCCTCGCTGG 2411410 |||||| | | || ||||||| ||| || || ||||||||| | ||||||| Sbjct 10827 TCTTGGTGACGGTGGCCTCGTC---ATCCAGCAGGTCGATCTTGGAGTTTGGGTCGCTGG 10883 Query 2411411 CGCTCATCTTGCCGTCCTTGGTGAGGCCCGGCACCAGCGGGTTGAGCAGGTGGATGCGCT 2411470 | |||||||||| ||| ||||| || |||| ||||| | | ||| |||| Sbjct 10884 CCGACATCTTGCCGCCCTGC---AGGCCGGGGACCATGGGGTTCATGATGTGCGCCCGCT 10940 Query 2411471 TGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGCGCAAAGGCAAAGATCTTGCGCTGGTCGC 2411530 | ||| |||||| ||||| || || || |||| |||||||||||| Sbjct 10941 GCCTGTATCCCAGCTTGGGCAGCCACTCCTTTGCGGCGGTGAAGAGCTTGCGCTGGTCCA 11000 Query 2411531 GCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGT 2411590 ||||||||||| |||| ||||| |||| ||||||||| ||| |||||| || |||| Sbjct 11001 CGCCGCCAAACTGCACGTCCACGTCCAGGTACTGCTCGTCCAGGACCTGCAGGATGGGGT 11060 Query 2411591 AGACGAGGTTGCTGAGCGGCGGGTT-GCGGTCCATCTTGACCACCTGGGCGGCGGCCT-- 2411647 | | || | ||||| | ||| || || | |||||| |||| ||| |||||| Sbjct 11061 ACAGCAGCCCGGACAGCGGGGCGTTGGCCGT-CTGCTTGACGACCTCAGCGCCGGCCTTC 11119 Query 2411648 TTTGCGCCGTGC 2411659 || ||| ||||| Sbjct 11120 TTGGCGTCGTGC 11131 >seq4356 Length=17895 Score = 95.1 bits (104), Expect = 2e-13 Identities = 118/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 1485547 GTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCC-GGC 1485605 ||||||||||| |||| | ||| ||| |||||| || || || || ||| Sbjct 8391 GTCTGGATCTCTCGGGAGGAGATGGTGGACTTCTTGTT-GTAGGCAGCAAGCTTAGAGGC 8449 Query 1485606 CTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTT 1485665 ||||||| | | ||| |||| ||||||||||| |||||||||| ||| ||||| | Sbjct 8450 CTCGGTGGCAACGCGCTCGAAGATGTCGTTGACGAACGAGTTCAGGATGGACATGGCACG 8509 Query 1485666 GTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||||||| || ||||||||| ||||||||||| || Sbjct 8510 GTTGGAGATACCAGTGTCGGGGTGGACCTGCTTGAGGAC 8548 >seq5060 Length=10639 Score = 87.8 bits (96), Expect = 3e-11 Identities = 93/120 (78%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 2233091 GTCGCCTTTCCCACCGAGACCGTCTATGGCCTCGGCGCCGACGCGGCGT-CAGACGAGGC 2233149 ||||| || ||||| || || ||||| ||||||||||| ||||| | ||| || || Sbjct 4535 GTCGCATTCCCCACAGAAACAGTCTACGGCCTCGGCGCAGACGCAACCCGCAG-CGCCGC 4593 Query 2233150 CGTACAGCGCATCTTTGACGCCAAGGGCCGACCGTCCAACAACCCGATCATCGTGCACGT 2233209 ||| || |||||| | |||||||||||| || || ||||||| ||||||||||||| Sbjct 4594 CGTCAAGGGCATCTACGCCGCCAAGGGCCGGCCTTCGGACAACCCCCTCATCGTGCACGT 4653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7914822895624698