Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq11228 114 8e-21 seq4985 104 2e-17 seq13121 89.7 3e-13 >seq11228 Length=3802 Score = 114 bits (126), Expect = 8e-21 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| || ||||| ||||| || || | || |||| |||| ||||| || ||||| Sbjct 338 CTCCTTTTGGATGTTGTAGTCAGACAGTGTCCGGCCATCTTCCAACTGCTTGCCAGCGAA 279 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 || || |||||||||||| | || | ||||||||||| | || || |||||| Sbjct 278 AATAAGACGTTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGAATCTTAGACTTGACGTT 219 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | |||||| |||| || || ||||||||||| | |||||| || Sbjct 218 GTCGATTGTGTCTGATGACTCGACTTCAAGAGTGATCGTCTTTCCCGTCAAGGTCTTGAC 159 Query 34966 AAAGATCTGCATG 34978 ||||||||||||| Sbjct 158 AAAGATCTGCATG 146 Score = 93.3 bits (102), Expect = 3e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | || |||||||| ||||| |||||||| ||| | || |||| Sbjct 130 AGGACCAGGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCATCC 71 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || |||||||| || |||||||| || |||||||| | || | ||||||||||| Sbjct 70 TCAAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTC 12 >seq4985 Length=7965 Score = 104 bits (114), Expect = 2e-17 Identities = 95/120 (79%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||| | |||| ||||||||| ||||| ||||| || ||| |||| | || Sbjct 7826 CAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTC 7885 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| |||||||||||||| || ||||||||| | || | || |||||||| Sbjct 7886 CTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 7945 >seq13121 Length=2348 Score = 89.7 bits (98), Expect = 3e-13 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| || ||| | || |||| || || ||||| |||||||||| Sbjct 105 CCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 46 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||| ||| ||||||||| | || | ||||||||||| Sbjct 45 TCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC 9 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325639681743458