Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq11228 89.7 5e-13 seq4985 87.8 2e-12 seq13121 82.4 7e-11 >seq11228 Length=3802 Score = 89.7 bits (98), Expect = 5e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | | |||||| | || || |||||||| || ||||| Sbjct 109 TCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCATCCTCAAGCTGCTTTCCAGCAAAG 50 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 |||| ||||||||||| | ||||| || |||||||||| |||||| Sbjct 49 ATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTT 3 >seq4985 Length=7965 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || ||||| || | || |||||| || |||||||| |||| Sbjct 7812 CCACCACGCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 7871 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || |||| || |||||||| || || || |||| ||||||||||| | ||| Sbjct 7872 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGA 7931 Query 35630 ACGCTCTCCTTGTCCATGATCTT 35652 | || ||||||||| |||||| Sbjct 7932 ATGCCTTCCTTGTCCTGGATCTT 7954 >seq13121 Length=2348 Score = 82.4 bits (90), Expect = 7e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || |||||||| |||| | ||| || | || || |||||||| || || || | Sbjct 105 CCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 46 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCT 35651 |||| ||||||||||| | |||| || |||||||||| ||||| Sbjct 45 TCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450718193500560