Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq12282 109 8e-19 >seq12282 Length=8984 Score = 109 bits (120), Expect = 8e-19 Identities = 327/502 (65%), Gaps = 7/502 (1%) Strand=Plus/Minus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 || ||||| |||||||| || ||||| || || || || ||||| | | || || || Sbjct 8065 TTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGAGAGAGATGTTC 8006 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 |||||||| || || || || | || || || || | | || | | | Sbjct 8005 TCCATGAAGTCGAAGGGGTTTGATGACTTGTAAACCTTCTCATTGCCCAGAGCGACCAGT 7946 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 | | || |||||||| || ||||| |||||| | | | ||||| || | ||| Sbjct 7945 AGACGGTCGGCAACAAACTCGATGTACTGTTTCATGAGGTTGGAGTTCATGCCGAGGAGG 7886 Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565 ||| |||||||| || | ||||| || |||||| | || ||||| || || || Sbjct 7885 GCGCATGGCAGAGCCTCGGTCAAGAACTCCTTCTCGATGGCAACAGCCTCGGTGATGAT- 7827 Query 39566 GATGTT--ACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGA 39623 || | || || | ||||| ||| | | || |||| | || |||| Sbjct 7826 -ATCCTCAACACGCTGTTTGCTCGGACGATTCCTCAGGTGAGAGAACAGGAGACAAGCGA 7768 Query 39624 AGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCA 39683 |||| || || |||||||| | | ||||| ||||| || || || || ||||||| Sbjct 7767 AGTCGGTGTGCAGACCCTCATCACGAGAAATTAGCTCGTTGGAGAAGGTCAGGCCAGGCA 7708 Query 39684 TTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTT 39743 | ||||| ||||| |||||||| || |||| || || | || ||||||||||| | Sbjct 7707 TGAGACCGCGCTTCTTGAGCCAGAAAATGGAGGCGAATGCGCCGCTGAAGAAGATGCCCT 7648 Query 39744 CTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATC---ATTATGTATCCACT 39800 | || || || || ||||| |||| || | || | | || | || ||||||| Sbjct 7647 CCACGGCAGCGAAGGCAACCAGTCGCTGGGCATAGGTGGACTCGCGGTCCTGGATCCACT 7588 Query 39801 TCTGTGCCCAATCAGCTTTCTT 39822 || | ||||| || || ||||| Sbjct 7587 TCAGAGCCCAGTCGGCCTTCTT 7566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686793897330480