Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq7991 215 6e-51 seq12282 95.1 2e-14 >seq7991 Length=9451 Score = 215 bits (238), Expect = 6e-51 Identities = 1141/1788 (64%), Gaps = 67/1788 (4%) Strand=Plus/Plus Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390 ||||||| || ||| ||| |||| | ||||| |||||||| || |||||||| | Sbjct 1176 TGAACTGGATGGGTGCGGCAGCTGCCTGAGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 1235 Query 110391 CTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTC-CATG 110449 | | ||||| | | |||||| | || |||| ||| | ||| || | |||| Sbjct 1236 CGAGCTTCCAGCCCGCGAAGTGCATACTGGTGATCTTGCCCATGGATGG-CTCCCGCATG 1294 Query 110450 AAGAGGTTCATACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATAT---CA 110506 || ||||| | ||| |||||||| ||| || || | || | ||| | || Sbjct 1295 TGGATGTTCAGAGACTGAGACTGGTCAATAAAGGCACCACGGTCAGCAGACATCTGCACA 1354 Query 110507 ATGACATCCTTCATCTTA---ATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCT 110563 ||| || ||| | || ||||| || || || || |||||||||| | Sbjct 1355 ATGG------TCCTCTGAGAGATCTCCCAGACGGTCTTGTAAAGGGCCTTGATATCAGCC 1408 Query 110564 GGGATATCTGAGA-TATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATC 110622 ||||| ||| || | ||||||||||||| || | | || | | |||||| | Sbjct 1409 GGGATG-CTGGGAATGCTCTGGATGGAACCATCCTCGGCGATAATACGGTTCTTCATGGC 1467 Query 110623 CTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAA 110682 || ||||| | |||| || | || || ||| || | |||||| | || Sbjct 1468 CTCAGACCACAAGCCAAGCTCTGTCAGATCCCTGAGAAGCCACGGGTTGACGACCTGGAA 1527 Query 110683 CTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATT 110742 ||| || ||||| | || | |||||||||| | |||||||| || ||||| ||||| Sbjct 1528 CTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCGAAGCACTCATT 1587 Query 110743 ATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACG 110802 ||||||| ||| || | || || || || ||||||||||||| ||| | |||||| || Sbjct 1588 GTTACCCAGGATCTGCGACGTCGAAGCAGTGGGCATTGGTGCCAGCAACAAACTGTTGCG 1647 Query 110803 AAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTT 110861 | ||| |||||||||| |||||||| |||||||||| | | | || || Sbjct 1648 TACACCAGTCTCCTTGATCTTGTCCTTGAGCGCATCCCAGTCCCAAAGGTCGGAAGGCTT 1707 Query 110862 CACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTT 110921 || |||| ||||||||||||| || | || || || | || ||||| | || | Sbjct 1708 GACATTCC-ACATGTCAAACTGCAGGATGCCCTGTGAGACTGGGCTGCCCTCGTATGTCT 1766 Query 110922 CATA-GGAACCTTGGGCTTCAGCCAAT-TCACAGCTCGCCTCCAGGGATGCGTGATACAT 110979 || || ||| ||| | |||| |||| || || | || || || || Sbjct 1767 TGTATGGGCCCTCCACCTT--GGCAATATCACTTGATGCAGTGAGAGCAGCATGGTAGAT 1824 Query 110980 GGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAG 111034 ||| || ||||| | ||| | ||| || || || || || |||| || Sbjct 1825 GGTCTCGAAGATCTGCTTATTTAGCTCGCGAGCCTCTGGAGAGTCGAAAGGCATGCGAAG 1884 Query 111035 CGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGC 111094 ||| ||| | || | || || ||||| |||||||| | ||||||||| | ||||||| Sbjct 1885 -GGC-CAAGA---ATGCGTCAGCAAGACCCTGAACACCGACACCAATAGGCCGGTGTCGC 1939 Query 111095 ATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGA 111154 || || || || || || ||||| ||| ||||||| ||| || Sbjct 1940 ATGTTGCTGTTATAGGCCTCCTTGACCGGATAGTGATTGACATCAATGATCTTGTTCAGG 1999 Query 111155 TTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAA--AGTGCGAGTC- 111211 || | | | || || | || || | | | | | | ||| ||| Sbjct 2000 TTGCGGACGATGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAGCAGTTGTTGTCG 2059 Query 111212 TCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCC 111271 | ||| || || || || || || || ||||| ||||| || || ||| ||| Sbjct 2060 TAGTCA---ACGTATGCAGGTAGAGCAATGGAGGCCAAGTTGCACACGGCGACCTCGTCC 2116 Query 111272 TTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTC 111331 | |||||| | || ||||| || | |||||| || ||| || |||| ||| Sbjct 2117 GGTGCACAGTACTCGATGATCTCTGTGCAGAGGTTGGAGCTTCGAATGGTACCCAGGTTC 2176 Query 111332 TTTTGGTTACTCTTCTTGTT-GCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 111390 || ||||| ||||| ||| || | ||||| || |||||| |||| | || ||||| Sbjct 2177 TTCTGGTTGCTCTTGCGGTTTGCGTGG-TCCTTATACAGCATGAAGGGGTTGCCAGTCTC 2235 Query 111391 CGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTTGG--- 111446 ||||| | || ||||||||| | ||| | | || | | || |||| ||| Sbjct 2236 GGTCTGAGCTTCGAGAATAGCATACCACAGCTTCTGGGCCTTC----ATGGTCTTGCGAC 2291 Query 111447 CCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGG 111506 | || |||||| |||||||| |||||| || || ||||| || || ||||| Sbjct 2292 CTCGGCCCTCCTTCTCGTACTGCTCGTAGAGAGCCTCGAACTCATCGCCGTAGCAGTCGG 2351 Query 111507 AGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCT 111566 ||| || || || || ||||| | || | ||| | ||| | ||| ||||||| Sbjct 2352 CGAGGCCAGGACACTCGTTAGGACACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCT 2411 Query 111567 TCATGAAAAGGTCTGGAATCCACAGGG-ATGAAAAGAGATCTCTACACCGAGCCTCTTCG 111625 |||||||||| || || ||||| |||| | | ||| ||||| | || ||| || Sbjct 2412 TCATGAAAAGATCGGGGATCCAGAGGGCAAGGAAA-AGATCACGGGCTCGGATCTCCTCC 2470 Query 111626 TCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGA 111685 | || ||||| || | ||||||||||| | || ||| ||||||||||||||||| Sbjct 2471 TTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCAGCGTGCCATGGCTCAAGG 2530 Query 111686 TAGACTGCGATAGATCC------CTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGT 111738 |||| || | || || ||| | | ||||| |||| || || || || || Sbjct 2531 TAGATAGCAAAAGCACCAGGACGCTTATTGCCGCCC----TGATCGACGTATCGGGCGGT 2586 Query 111739 GGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA- 111796 | ||| || || || |||||||| | || |||| ||| || || || || ||| Sbjct 2587 GTTGTTGAAGACCCGCAGCATTGGTGTGATGCCATTAGATGTGCCGTTAGTGCCAGCGAT 2646 Query 111797 ATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTT 111856 || ||| |||| | | || | || || || ||||| || ||| ||| Sbjct 2647 GTATGAG--CCGGTGGCACGGATGCGGTGCACGTTCAGACCGATACCACCCGCCATCTTG 2704 Query 111857 GAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTG 111916 ||||| ||||| | | || || | || || || | ||| ||||||||| || Sbjct 2705 GAGATCATAGCACAAGTCTTGAGGGTGTCGTAAATGCCCTCGATGCTGTCCTCCTTCATG 2764 Query 111917 GCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGT 111976 ||| ||||||||| |||| ||| || || || ||||||||||| | || || Sbjct 2765 TCGACAAGGAAGCATGATGACAACTGGGGCTGAGGCGTGCCAGCATTGAACAAAGTGGGC 2824 Query 111977 GTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAAT 112035 | || || |||| | || | | |||||| || ||| ||||| | ||| || | Sbjct 2825 GAGGCATGTGTGAAGA-ACTTATTTGACATCAGGTTGTAGGTCTCGATGACCCTCTCGAC 2883 Query 112036 GTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 || || || ||| |||| ||||| ||||||| ||||| ||||| Sbjct 2884 ATCGTCTCCCCAGATACCGACAGCGACACGCATGATCATGTGTTGTGG 2931 >seq12282 Length=8984 Score = 95.1 bits (104), Expect = 2e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||| ||||||||||| || ||||| || || || |||||| || || ||||||||||| Sbjct 7760 GTGCAGACCCTCATCACGAGAAATTAGCTCGTTGGAGAAGGTCAGGCCAGGCATGAGACC 7701 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCAC 122786 |||||||| | ||| |||| | | ||||| ||| ||||||||| |||||||| Sbjct 7700 GCGCTTCTTGAGCCAGAAAATGGAGGCGAATGCGCCGCTGAAGAAGATGCCCTCCAC 7644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627926945947200