Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq7991 210 3e-49 seq12282 113 6e-20 >seq7991 Length=9451 Score = 210 bits (232), Expect = 3e-49 Identities = 1146/1812 (63%), Gaps = 43/1812 (2%) Strand=Plus/Plus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 ||||||| |||||| || |||| | |||||||||||||| || |||||||| | Sbjct 1176 TGAACTGGATGGGTGCGGCAGCTGCCTGAGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 1235 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTC-CATG 117923 | |||||||| | | ||||| || | |||| | || ||| || | |||| Sbjct 1236 CGAGCTTCCAGCCCGCGAAGTGCATACTGGTGATCTTGCCCATGGATGG-CTCCCGCATG 1294 Query 117924 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 117983 || ||||| | || || || || || ||| || || || || | ||| | | Sbjct 1295 TGGATGTTCAGAGACTGAGACTGGTCAATAAAGGCACCACGGTCAGCAGACATCTG---C 1351 Query 117984 ACATCCTTCATCTT---GATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGG 118040 ||| || ||| ||| ||||| || ||| |||| ||| ||| |||||| | ||| Sbjct 1352 ACAATGGTCCTCTGAGAGATCTCCCAGACGGTCTTGTAAAGGGCCTTGATATCAGCCGGG 1411 Query 118041 ATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTT 118100 || || | |||||||| ||| || | || || | | |||||| ||| Sbjct 1412 ATGCTGGGAATGCTCTGGATGGAACCATCCTCGGCGATAATACGGTTCTTCATGGCCTCA 1471 Query 118101 GACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCA 118160 ||||| | |||| || | | |||||| | || | ||||| || ||||| Sbjct 1472 GACCACAAGCCAAGCTCTGTCAGATCCCTGAGAAGCCACGGGTTGACGACCTGGAACTCG 1531 Query 118161 CCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTA 118220 || ||||| |||| | | ||||| |||| ||||||||||| ||||||||||||||| Sbjct 1532 CCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCGAAGCACTCATTGTTA 1591 Query 118221 CCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGA 118280 |||| ||| || | || || || |||||||| ||||||| | | ||||| || | | Sbjct 1592 CCCAGGATCTGCGACGTCGAAGCAGTGGGCATTGGTGCCAGCAACAAACTGTTGCGTACA 1651 Query 118281 CCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCC 118340 || | ||| | || |||||||| || |||||||| | | | || | Sbjct 1652 CCAGTCTCCTTGATCTTGTCCTTGAGCGCATCCCAGTCCCAAAGGTCGGAAGGCTTGACA 1711 Query 118341 TGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATAT 118400 | |||||| |||||||| ||||| || || || |||| ||||| |||||| ||| Sbjct 1712 TTCCACATGTCAAACTGCAGGATGCCCTGTGAGACTGGGCTGCCCTCGTATGTCTTGTAT 1771 Query 118401 GGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCA 118460 |||||||| |||| || | || || ||| || || || || || || || Sbjct 1772 GGGCCCTCCACCTTGGCAATATCACTTGATGCAGTGAGAGCAGCATGGTAGATGGTCTCG 1831 Query 118461 AAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATC-AAACGC--GAGTCGGCACAAA 118517 || || | ||| | | ||||| || || ||| || | | || ||| Sbjct 1832 AAGATCTGCTTATTTAGCTCGCGAGCCTCTGGAGAGTCGAAAGGCATGCGAAGGGCCAA- 1890 Query 118518 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 118577 ||| | || || ||||| || ||||||| ||||| || || |||| ||| || Sbjct 1891 --GAATGCGTCAGCAAGACCCTGAACACCGACACCAATAGGCCGGTGTCGCATGTTGCTG 1948 Query 118578 TTCCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTG 118634 || | || |||| || ||||| ||| ||| || | | | || || || | Sbjct 1949 TT---ATAGGCCTCCTTGACCGGATAGTGATTGACATCAATGATCTTGTTCAGGTTGCGG 2005 Query 118635 GTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTG 118694 || |||| || | || || | || | | | | | | | | || | | Sbjct 2006 ACGATGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAGCAGTTGTTGTCGTAGTCA 2065 Query 118695 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 118754 || || ||| || || || || |||| || ||||| | | ||| ||| || | Sbjct 2066 ACGTATGCAGGTAGAGCAATGGAGGCCAAGTTGCACACGGCGACCTCGTCCGGTGCACAG 2125 Query 118755 TACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 118814 ||||| || || || ||||| | ||| || || |||||| |||| |||||| || || Sbjct 2126 TACTCGATGATCTCTGTGCAGAGGTTGGAGCTTCGAATGGTACCCAGGTTCTTCTGGTTG 2185 Query 118815 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGAC 118874 ||| ||| ||||| || |||||| | || | || ||||| || || | Sbjct 2186 CTCTTGCGGTTTGCGTGGTCCTTATACAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCT 2245 Query 118875 TTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTG---GCTCGCCCCTC 118930 | ||||||||| | ||| | | || | || || ||| ||| |||| ||||| Sbjct 2246 TCGAGAATAGCATACCACAGCTTCTG-GGCCTTCA---TGGTCTTGCGACCTCGGCCCTC 2301 Query 118931 TTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGG 118990 | |||||||| |||||| || || ||||| || || | || | ||| || || Sbjct 2302 CTTCTCGTACTGCTCGTAGAGAGCCTCGAACTCATCGCCGTAGCAGTCGGCGAGGCCAGG 2361 Query 118991 TGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAG 119050 || | || || | || | ||| | ||| || ||| |||||||||||||| || Sbjct 2362 ACACTCGTTAGGACACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAAAAG 2421 Query 119051 GTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATT 119110 || ||||||||||| || ||| ||||| || || || || | || || || Sbjct 2422 ATCGGGGATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTGCCGTGGTT 2481 Query 119111 GAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGAT 119170 |||| || | || || | || ||| |||||||| || || ||||| | || | Sbjct 2482 CTTGCGCAGGTCAAGGAACTCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAA 2541 Query 119171 TGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACG 119227 | || ||| | || |||| | || || | || ||| ||| || || || Sbjct 2542 AGCACCAGGACGCTTATTGCCGCCCTGATCGACGTATCGGGCGGTGTTGTTGAAGACCCG 2601 Query 119228 AAGCATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTG 119285 |||||||| |||| |||| ||| ||| || || || ||| || ||| | || Sbjct 2602 CAGCATTGGTGTGATGCCATTAGATGTGCCGTTAGTGCCAGCGATGTATGAGCC--GGTG 2659 Query 119286 GCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCAC 119345 || | || ||| | || || ||| ||||| || ||| ||| ||||| || || Sbjct 2660 GCACGGATGCGGTGCACGTTCAGACCGATACCACCCGCCATCTTGGAGATCATAGCACAA 2719 Query 119346 TCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAG 119405 | |||| || |||| || || ||||| ||| |||| | ||| |||||||| Sbjct 2720 GTCTTGAGGGTGTCGTAAATGCCCTCGATGCTGTCCTCCTTCATGTCGACAAGGAAGCAT 2779 Query 119406 CTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAAC 119465 |||| || ||| || || ||||| ||||| | ||| || | || || |||| Sbjct 2780 GATGACAACTGGGGCTGAGGCGTGCCAGCATTGAACAAAGTGGGCGAGGCATGTGTGAAG 2839 Query 119466 ATACCT-TGGGACATCTTGTCGTAGGTCTCCAAGAC---GGCGGGAATGTCTTCCCCGTG 119521 | || | | |||||| || ||||||||| | ||| || | |||| ||| | Sbjct 2840 A-ACTTATTTGACATCAGGTTGTAGGTCTCGATGACCCTCTCGACATCGTCTCCCCAG-- 2896 Query 119522 AATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAG 119581 ||||||| | ||| ||||| | ||||| ||| ||| || | | |||||||||| Sbjct 2897 -ATACCGACAGCGACACGCATGATCATGTGTTGTGGTCGCTCAACAACTTTACCATCGAG 2955 Query 119582 CCTCTGGAGGTA 119593 | | ||||||| Sbjct 2956 CTTGAGGAGGTA 2967 >seq12282 Length=8984 Score = 113 bits (124), Expect = 6e-20 Identities = 297/450 (66%), Gaps = 4/450 (1%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| ||||| |||||||| |||||||| ||||| || | | ||| |||||||| Sbjct 8059 TAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGAGAGAGATGTTCTCCATG 8000 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACT-CCAATCTGTTTGAGGAGAC 129845 || || || ||||| ||| || ||| | || || | || | || |||| Sbjct 7999 AAGTCGAAGGGGTTTGATGACTTGTAAACCTTCT--CATTGCCCAGAGCGACCAGTAGAC 7942 Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905 | || | || |||| ||||||| ||| | ||||||||| |||| |||| | Sbjct 7941 GGTCGGCAACAAACTCGATGTACTGTTTCATGAGGTTGGAGTTCATGCCGAGGAGGGCGC 7882 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 |||| || || || | |||| ||||||| ||| | ||||| || | ||| | | Sbjct 7881 ATGGCAGAGCCTCGGTCAAGAACTCCTTCTCGATGGCAACAGCCTCGGTGATGATATCCT 7822 Query 129966 GAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCT 130025 || || ||| || | ||| | || ||| || || || || Sbjct 7821 CAACACGCTGTTTGCTCGGACGATTCCTCAGGTGAGAGAACAGGAGACAAGCGAAGTCGG 7762 Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085 ||| |||||||| ||||| || || || || || |||||| ||| || |||||||||| Sbjct 7761 TGTGCAGACCCTCATCACGAGAAATTAGCTCGTTGGAGAAGGTCAGGCCAGGCATGAGAC 7702 Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 130145 | |||||||| | ||||||||| | |||| ||| ||||||||| |||||||| Sbjct 7701 CGCGCTTCTTGAGCCAGAAAATGGAGGCGAATGCGCCGCTGAAGAAGATGCCCTCCACGG 7642 Query 130146 ACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 ||||| |||| || |||| ||| ||| Sbjct 7641 CAGCGAAGGCAACCAGTCGCTGGGCATAGG 7612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618331751251920