Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq7991 250 3e-61 seq12282 107 2e-18 >seq7991 Length=9451 Score = 250 bits (276), Expect = 3e-61 Identities = 1152/1795 (64%), Gaps = 81/1795 (5%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 ||||| ||||| ||||||| || || ||||||| || || || | || ||| Sbjct 2931 CCACAACACATGATCATGCGTGTCGCTGTCGGTATCTGGGGAGACGATGTCGAGAGGGTC 2872 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||| || |||||| | | || | |||| || || | || || | || Sbjct 2871 ATCGAGACCTACAACCTGATGTCAAATAAGT-TCTTCACACATGCCTCGCCCACTTTGTT 2813 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||||||||| || || ||||| |||| ||||||||| ||| || |||||||| Sbjct 2812 CAATGCTGGCACGCCTCAGCCCCAGTTGTCATCATGCTTCCTTGTCGACATGAAGGAGGA 2753 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 | ||| | || || || | || || | | ||||| ||||| ||| ||| || Sbjct 2752 CAGCATCGAGGGCATTTACGACACCCTCAAGACTTGTGCTATGATCTCCAAGATGGCGGG 2693 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACA 104518 ||||| || || || | || | | |||| ||| || ||| || || Sbjct 2692 TGGTATCGGTCTGAACGTGCACCGCATCCGTGCCACCGG--CTCATACATCGCTGGCACT 2635 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 || || ||| |||| || | |||||||| || || || ||| ||| || || || Sbjct 2634 AACGGCACATCTAATGGCATCACACCAATGCTGCGGGTCTTCAACAACACCGCCCGATAC 2575 Query 104579 GTAAATCAAGCTGGGCGTCGA-AAG------GGATCTATCGCAGTCTATCTTGAGCCATG 104631 || |||| ||||| | | ||| || || | || |||| ||||||||||| Sbjct 2574 GTCGATCA----GGGCGGCAATAAGCGTCCTGGTGCTTTTGCTATCTACCTTGAGCCATG 2519 Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691 |||||| ||| || | ||||||||||| |||| ||||| || | |||||| || Sbjct 2518 GCACGCTGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGATCCG 2459 Query 104692 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 104751 ||| ||||| ||| || |||||||| || ||||| ||||||||| | || ||| | Sbjct 2458 AGCCCGTGATCTTTTCCTTGCCCTCTGGATCCCCGATCTTTTCATGAAGCGGGTCGAGAA 2399 Query 104752 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGG 104811 || || | ||| | || | ||||| || || ||||| ||| |||| | || Sbjct 2398 GAACGGTGACTGGACCCTGATGTGTCCTAACGAGTGTCCTGGCCTCGCCGACTGCTACGG 2339 Query 104812 TGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGA------AGGTCGGGCGACTGC 104865 || ||||| || || || ||| |||||||| | || |||||| ||| Sbjct 2338 CGATGAGTTCGAGGCTCTCTACGAGCAGTACGAGAAGGAGGGCCGAGGTCGCAAGACCAT 2279 Query 104866 GACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 104925 || || |||| || ||||| | ||||||||| | |||| ||||||||||| | Sbjct 2278 GAAGG-CCCAGAAGC-----TGTGGTATGCTATTCTCGAAGCTCAGACCGAGACTGGCAA 2225 Query 104926 ACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 104985 || | |||||| || || ||| | |||| ||||| || || ||||| ||||| Sbjct 2224 CCCCTTCATGCTGTATAAGGACCACGCAAACCGCAAGAGCAACCAGAAGAACCTGGGTAC 2165 Query 104986 GATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAG-ACA-AAGATGAGACG 105043 || || ||||| ||||| ||||| ||| | || ||| | || || ||| Sbjct 2164 CATTCGAAGCTCCAACCTCTGCACAGAGATCATCGA--GTACTGTGCACCGGACGAGGTC 2107 Query 105044 GCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC- 105102 || ||||| ||| | || || || ||||| || || || || | ||||| || Sbjct 2106 GCCGTGTGCAACTTGGCCTCCATTGCTCTACCTGCATACGTTGA--CTACGACAACAACT 2049 Query 105103 -ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAG 105161 | | | | | | ||||| ||||| | || | ||||| |||| Sbjct 2048 GCTACAACTTCCAGCAGTTGCACGAGGTTACCCAGGTCATCGTCCGCAACCTGAACAAGA 1989 Query 105162 TTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTC 105221 | |||||| ||| || || || || || ||| || ||| ||||||| | Sbjct 1988 TCATTGATGTCAATCACTATCCGGTCAAGGAGGCCTATAACAGCAACATGCGACACCGGC 1929 Query 105222 CAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTG----TCGCCACGCA 105277 | |||||| |||||||||||||||| || || | ||||||| | ||| || || Sbjct 1928 CTATTGGTGTCGGTGTTCAGGGTCTTGCTGACG----CATTCTTGGCCCTTCG-CATGCC 1874 Query 105278 TTT-GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGC 105336 ||| || || || || || | ||| || || || |||||||| || || || Sbjct 1873 TTTCGACTCTCCAGAGGCTCGCGAGCTAAATAAGCAGATCTTCGAGACCATCTACCATGC 1814 Query 105337 CGCTCT---TGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGA 105393 ||||| || | ||| || | || |||| || || ||||| | || | || Sbjct 1813 TGCTCTCACTGCATCAAGT---GATATTGCCAAGGTGGAGGGCCCATACAAGACATACGA 1757 Query 105394 GGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAG-C 105452 ||| |||| ||||| || | || || ||||| |||| |||| || |||| | Sbjct 1756 GGGCAGCCCAGTCTCACAGGGCATCCTGCAGTTTGACATGT-GGAATGT-----CAAGCC 1703 Query 105453 TTC--AC---TACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAA 105507 ||| || | |||||||| || |||||||| |||||||||| ||| | || || Sbjct 1702 TTCCGACCTTTGGGACTGGGATGCGCTCAAGGACAAGATCAAGGAGACTGGTGTACGCAA 1643 Query 105508 CAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGA 105567 |||| | | |||| |||||||| || || || || | || ||| ||||||| ||||| Sbjct 1642 CAGTTTGTTGCTGGCACCAATGCCCACTGCTTCGACGTCGCAGATCCTGGGTAACAATGA 1583 Query 105568 ATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGT 105627 ||||| || || ||||| | |||||||| | | || | ||||| || ||||| Sbjct 1582 GTGCTTCGAGCCATACACCTCCAACATCTACCAGCGACGTGTGCTCGCTGGCGAGTTCCA 1523 Query 105628 GATTGTCAAC---AAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGA 105684 | | |||||| || |||| |||| || | |||| |||| | ||||| ||| Sbjct 1522 GGTCGTCAACCCGTGGCTTCTCAGGGAT---CTGACAGAGCTTGGCTTGTGGTCTGAGGC 1466 Query 105685 TATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAA 105744 |||||| | | || | | || ||||||||| || | ||| || || Sbjct 1465 CATGAAGAACCGTATTATCGCCGAGGATGGTTCCATCCAGAGCATTCCCAGCATCCCGGC 1406 Query 105745 TGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTG---A 105801 ||| || ||| | ||| || || ||||| ||| | |||| ||||| | Sbjct 1405 TGATATCAAGGCCCTTTACAAGACCGTCTGGGAGATCTCTCAG-AGGA--CCATTGTGCA 1349 Query 105802 CATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATG-G 105860 ||| | || || |||||| ||| ||||| || ||| | |||| || |||| | Sbjct 1348 GATGTCTGCTGACCGTGGTGCCTTTATTGACCAGTCTCAGTCTCTGAACATCCACATGCG 1289 Query 105861 AAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCA 105920 || ||| | ||| |||| || | ||||||| | | |||||| ||||||| Sbjct 1288 GGAG-CCATCCATGGGCAAGATCACCAGTATGCACTTCGCGGGCTGGAAGCTCGGTCTCA 1230 Query 105921 AAACGGGGATGTATTACCTCCGATCTAAGGCAAAGGCGCGC-CCAATTCAGTTCA 105974 | || || ||||| |||||||| || ||||| || ||| || || ||||||| Sbjct 1229 AGACTGGCATGTACTACCTCCGCACTCAGGCAGCTGC-CGCACCCATCCAGTTCA 1176 >seq12282 Length=8984 Score = 107 bits (118), Expect = 2e-18 Identities = 153/215 (71%), Gaps = 8/215 (4%) Strand=Plus/Plus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCG 94793 ||| || || || | ||||| || || |||||| |||||||| || || |||| Sbjct 7550 AGTCCCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAAGTGG----ATCCAGGACCGCG 7605 Query 94794 TT----CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849 ||| ||| ||||||| | || || || || ||||| ||||||||| | Sbjct 7606 AGTCCACCTATGCCCAGCGACTGGTTGCCTTCGCTGCCGTGGAGGGCATCTTCTTCAGCG 7665 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 | | ||| | | |||| |||||||||||||| ||||||||||| || || ||||| Sbjct 7666 GCGCATTCGCCTCCATTTTCTGGCTCAAGAAGCGCGGTCTCATGCCTGGCCTGACCTTCT 7725 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||||||||| || |||||||| ||||| || ||| Sbjct 7726 CCAACGAGCTAATTTCTCGTGATGAGGGTCTGCAC 7760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583163235049680