Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq4614 159 1e-33 seq11228 129 2e-24 seq4277 95.1 4e-14 >seq4614 Length=12099 Score = 159 bits (176), Expect = 1e-33 Identities = 481/736 (65%), Gaps = 19/736 (3%) Strand=Plus/Plus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 ||||| | || || ||||| ||||| || || |||||||| | | ||| | |||| | Sbjct 10766 CCGCTGTTGGTATTGATTTGGGTACAACCTACTCTTGTGTGGGTATTTTCCGTGATGACC 10825 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | | || || ||||| || || ||||| ||| | || || || || | ||| || || | Sbjct 10826 GCATTGAGATCATTGCCAACGACCAAGGAAACCGGACCACCCCTTCCTTCGTCGCTTTCA 10885 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| || |||||| |||| || ||| | || || || || | || || || | | Sbjct 10886 CCGACACCGAGCGTCTGATCGGAGATGCGGCCAAGAACCAGGTCGCCATGAACCCCCACA 10945 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTT-----TCTGACAAATCTA 349430 | || || || ||||| ||||| | ||||| | ||||| ||||| || Sbjct 10946 ACACCGTCTTCGATGCGAAGCGGTTGATTGGCCGCAAGTTCCAGGACTCTGAGG--TC-- 11001 Query 349431 CACAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAA 349490 || | || | || || || || || | |||| | | ||| |||| || || | Sbjct 11002 --CAGGCCGACATGAAGCACTTCCCCTTCAAGATTGT-CGAGAAG--GGTGGCAAGCCCA 11056 Query 349491 TTATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC--GAAGAAATTTCATC 349548 || |||||||| | || || || || || || |||| || || || || || Sbjct 11057 ACATCGAGGTTGAGTTCAAGGGCGAGTCCAAG--ATCTTCACCCCAGAGGAGATCTCCTC 11114 Query 349549 AATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGA 349608 ||||| | || ||| || | || || | || | |||| || || | | Sbjct 11115 CATGGTCCTCACCAAGATGCGTGAGACCGCCGAGTCTTACCTGGGTGGCACCGTCAACAA 11174 Query 349609 TGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGC 349668 || || || ||||| || |||||||| || || | |||||| ||||| || ||||| Sbjct 11175 CGCCGTCATCACTGTTCCCGCCTATTTCAACGACTCTCAGCGTCAAGCAACCAAGGATGC 11234 Query 349669 TGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAAT 349728 ||| ||||| || | |||||||| | || || |||||||| || || || || || Sbjct 11235 TGGTCTTATTGCCGGCCTGAATGTTCTGCGTATCATCAATGAACCAACCGCCGCCGCCAT 11294 Query 349729 TGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGG 349788 ||| ||||| || || || | | || || || | || || || || | || Sbjct 11295 TGCTTATGGTCTCGACAAGAAGGTCGAGGGCGAGCGCAACGTCCTGATCTTCGACCTGGG 11354 Query 349789 TGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGC 349848 ||||||||||| ||||| || || || || | || ||||| || || || || || | Sbjct 11355 CGGTGGTACTTTCGATGTCTCGCTCCTGACCATCGAGGAGGGTATCTTCGAGGTCAAGTC 11414 Query 349849 AACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTT 349908 ||||| ||||| || || || ||||| || || ||||| || ||||| || || || Sbjct 11415 CACTGCCGGTGACACTCACCTGGGTGGTGAGGACTTTGACAACCGTCTGGTCAACCACTT 11474 Query 349909 TGTTAAAGAATTTAAG 349924 ||| || || || ||| Sbjct 11475 TGTCAACGAGTTCAAG 11490 >seq11228 Length=3802 Score = 129 bits (142), Expect = 2e-24 Identities = 154/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| || || || ||||| ||||| || || || ||||| | ||| || |||||||| | Sbjct 353 CAAG-TGCAGCGTCGACTCCTTTTGGATGTTGTAGTCAGACAGTGTCCGGCCATCTTCCA 295 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 || || ||||| || || ||||||||||| || || || || || || || ||||||| Sbjct 294 ACTGCTTGCCAGCGAAAATAAGACGTTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGAA 235 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | |||| || || || || || | || |||| || |||||||| || | ||||||| Sbjct 234 TCTTAGACTTGACGTTGTCGATTGTGTCTGATGACTCGACTTCAAGAGTGATCGTCTTTC 175 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || | || || ||||| |||||||| Sbjct 174 CCGTCAAGGTCTTGACAAAGATCTGCAT 147 Score = 113 bits (124), Expect = 1e-19 Identities = 113/147 (77%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | || || || || |||||||| || || || || || || || Sbjct 149 CATGCCACCACGGAGGCGGAGGACCAGGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTC 90 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | ||||| ||||| ||||| || |||||||||||||| ||||| ||||| ||||| Sbjct 89 CGAGAGGGTTCGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGG 30 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTT 140653 |||||| || || || ||||| || || Sbjct 29 AGGAATGCCCTCCTTGTCCTGGATCTT 3 >seq4277 Length=7710 Score = 95.1 bits (104), Expect = 4e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 378232 ATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATT 378291 ||||||||||||| | || || || || ||||| || ||||| |||||||| |||| Sbjct 3525 ATATAACCAGTTTCAGCGGTCTTGACAGCGGTATCTATCAAACCCTCACGACCAGCCATG 3466 Query 378292 GCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCT 378351 || |||||||| || || || || || || |||| | | ||| |||| | || || Sbjct 3465 GCGTGGAAGAAGAACTCGGTCGGTGTCAGACCACGCAGGTAAGAATTCTCGACGAAGCCA 3406 Query 378352 CTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCA 378411 | || | ||||| | || | || ||| | ||||| | ||| || | || || ||| Sbjct 3405 CGGGCCTCGGGCGAGTAGTCGTCCTTCGTAAAGTGAGGCAGTGTCCGGTACTTGAATCCA 3346 Query 378412 TATGGAATTCGTTTTCCATCAACATTCTGTTGACC 378446 ||||||| | ||||| ||||| |||||| || Sbjct 3345 AATGGAATCCTCTTTCCCTCAACGACCTGTTGGCC 3311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514994599215746