Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq7991 253 2e-62 seq8642 131 2e-25 >seq7991 Length=9451 Score = 253 bits (280), Expect = 2e-62 Identities = 414/591 (70%), Gaps = 4/591 (1%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| ||||| | |||||| || ||||| | | | ||| ||||| ||| Sbjct 2918 TCATGCGTGTCGCTGTCGGTATCTGGGGAGACGATGTCGAGAGGGTCATCGAGACCTACA 2859 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 || | ||| | |||| ||| || || ||| |||| || ||||||| ||||| ||| Sbjct 2858 ACCTGATGTCAAATAAGTTCTTCACACATGCCTCGCCCACTTTGTTCAATGCTGGCACGC 2799 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 ||| || ||| |||| |||||||| || | |||||||| ||| ||||| |||| Sbjct 2798 CTCAGCCCCAGTTGTCATCATGCTTCCTTGTCGACATGAAGGAGGACAGCATCGAGGGCA 2739 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 | ||||| || |||||| ||||| ||||||||| | |||||||||||||| | Sbjct 2738 TTTACGACACCCTCAAGACTTGTGCTATGATCTCCAAGATGGCGGGTGGTATCGGTCTGA 2679 Query 53433 AC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGAT 53491 || ||| | | ||||||| | |||| || ||| || || |||||| | || Sbjct 2678 ACGTGCACCG-CATCCGTGCCACCGGCTCATACATCGCTGGCACTAACGGCACATCTAAT 2620 Query 53492 GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551 || ||| || ||||| || |||||||||||||| ||||| |||||| | ||||| || Sbjct 2619 GGCATCACACCAATGCTGCGGGTCTTCAACAACACCGCCCGATACGTCGATCAGGGCGGC 2560 Query 53552 GGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAG 53611 ||||| || | || || |||||||| ||||| |||||||| || | | ||| Sbjct 2559 AATAAGCGTCCTGGTGCTTTTGCTATCTACCTTGAGCCATGGCACGCTGATGTCTTTGAG 2500 Query 53612 TTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACA 53671 || || || ||||| ||| || || | || ||||| || |||||| || || Sbjct 2499 TTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGATCCGAGCCCGTGATCTTTTCCTT 2440 Query 53672 GCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTG 53731 || || ||||| || || || |||||| | ||| |||||| ||| || ||| |||| Sbjct 2439 GCCCTCTGGATCCCCGATCTTTTCATGAAGCGGGTCGAGAAGAACGGTGACTGGACCCTG 2380 Query 53732 ATGTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTACGGTGAGGAGTT 53781 ||||| || |||||||| || |||||| | | || |||||| || ||||| Sbjct 2379 ATGTGTCCTAACGAGTGTCCTGGCCTCGCCGACTG-CTACGGCGATGAGTT 2330 Score = 118 bits (130), Expect = 1e-21 Identities = 300/448 (67%), Gaps = 9/448 (2%) Strand=Plus/Minus Query 55482 TACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCA 55541 |||||||| || | |||| |||||||| || || |||||| | |||||| |||| | Sbjct 1649 TACGCAACAGTTTGTTGCTGGCACCAATGCCCACTGCTTCGACGTCGCAGATCCTGGGTA 1590 Query 55542 ACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTG 55601 |||| ||| |||||||| ||||| |||||||||||| ||| || || || || | Sbjct 1589 ACAATGAGTGCTTCGAGCCATACACCTCCAACATCTACCAGCGACGTGTGCTCGCTGGCG 1530 Query 55602 AGTTTGTCATGATCAACAAGCACCTCGTCAAGGACCTG-CAGAAGATCAACAAGTGGAAC 55660 |||| | ||||| | || ||| ||| ||| |||| | | | |||| Sbjct 1529 AGTTCCAGGTCGTCAACCCGTGGCTTCTCAGGGATCTGACAGA-GCTTGGCTTGTGGTCT 1471 Query 55661 CCGCAGATCAAGACGGATATTGT-GCGGAACGGGGGGTCCGTCCAGA--ATCTGGAGATT 55717 | || |||| |||| | || || | || ||| |||||| || || | Sbjct 1470 GAGGCCATGAAGAACCGTATTATCGCCGAG-GATGGTTCCATCCAGAGCATTCCCAGCAT 1412 Query 55718 CCT--CTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGA 55775 || ||| | |||||| ||||| ||| || |||||||| | |||| || | Sbjct 1411 CCCGGCTGA-TATCAAGGCCCTTTACAAGACCGTCTGGGAGATCTCTCAGAGGACCATTG 1353 Query 55776 TTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCA 55835 | | ||| |||||| |||||||| | || |||||||| ||||||||||||||| || Sbjct 1352 TGCAGATGTCTGCTGACCGTGGTGCCTTTATTGACCAGTCTCAGTCTCTGAACATCCACA 1293 Query 55836 TGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGAC 55895 || | | || || ||| |||| | | | |||||||| || |||||| || | Sbjct 1292 TGCGGGAGCCATCCATGGGCAAGATCACCAGTATGCACTTCGCGGGCTGGAAGCTCGGTC 1233 Query 55896 TCAAGACGGGTATGTACTATCTGCGGAC 55923 ||||||| || |||||||| || || || Sbjct 1232 TCAAGACTGGCATGTACTACCTCCGCAC 1205 >seq8642 Length=22301 Score = 131 bits (144), Expect = 2e-25 Identities = 210/302 (70%), Gaps = 0/302 (0%) Strand=Plus/Plus Query 117299 AGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCG 117358 ||||| || || |||||||||| ||| || | ||| | ||||| || ||||| | |||| Sbjct 3784 AGGCGGGTAAAGATGTAACGAGCGCTGGCCGAATCGCTACCACCGGCGAGACGAGAACCG 3843 Query 117359 AATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAG 117418 || | || || ||||||| || ||||| |||||| | || |||||||| || |||||| Sbjct 3844 AAGTTACCGCTGGGCTCCAGGATGTTCACGTTGTTCGATCCGACAAAGTTCTGGGCCAAG 3903 Query 117419 TTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACG 117478 | || || || | | | || || || || || ||||||||||| | || Sbjct 3904 CCAATGATTGTCTGCTGTAAGGAAACTTCGCCGTGATGGTAGGCCGTCTGCTCAGAGACA 3963 Query 117479 TAGCCCGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAA 117538 || || |||| | | | |||||| |||| |||| ||| ||||| |||||| || Sbjct 3964 TATCCAGCCAATTCAACGACCTTCTTGTCCTTGGTCAAGTTGCGCTTGAAGCAGGCGTAG 4023 Query 117539 ATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATCGAACGCTTGATG 117598 || ||||| ||||||| ||||| | || ||| | ||| || || || ||| | || Sbjct 4024 ATGACCTTTCGCTGACCCGGCTTTAATCCGTCCACGACGGACGGAATGGACCGCAGGTTG 4083 Query 117599 TC 117600 || Sbjct 4084 TC 4085 Score = 125 bits (138), Expect = 8e-24 Identities = 207/299 (69%), Gaps = 0/299 (0%) Strand=Plus/Plus Query 152026 CGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAAC 152085 || || |||||||| || | |||||||| ||| | ||||| || || || | || || Sbjct 3787 CGGGTAAAGATGTAACGAGCGCTGGCCGAATCGCTACCACCGGCGAGACGAGAACCGAAG 3846 Query 152086 TGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTC 152145 | || |||||| |||| ||| | |||||| | || || || ||||| ||||| Sbjct 3847 TTACCGCTGGGCTCCAGGATGTTCACGTTGTTCGATCCGACAAAGTTCTGGGCCAAGCCA 3906 Query 152146 ACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTAT 152205 | || || ||| | |||| ||||| || || ||||||||||| | || ||| Sbjct 3907 ATGATTGTCTGCTGTAAGGAAACTTCGCCGTGATGGTAGGCCGTCTGCTCAGAGACATAT 3966 Query 152206 CCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATC 152265 || ||||| | | |||||| ||||| | |||| ||| ||||| |||||||| || Sbjct 3967 CCAGCCAATTCAACGACCTTCTTGTCCTTGGTCAAGTTGCGCTTGAAGCAGGCGTAGATG 4026 Query 152266 ACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACGCTTGATGTC 152324 ||||| ||||| || || || |||||||| ||| ||||| || ||| | |||| Sbjct 4027 ACCTTTCGCTGACCCGGCTTTAATCCGTCCACGACGGACGGAATGGACCGCAGGTTGTC 4085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547124464443600