Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq5359 170 2e-37 >seq5359 Length=3099 Score = 170 bits (188), Expect = 2e-37 Identities = 286/409 (70%), Gaps = 26/409 (6%) Strand=Plus/Minus Query 30061 CACGTAAAACTG---ACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 30117 |||||||||||| | ||||| |||||||| || || ||||| || ||| Sbjct 2628 CACGTAAAACTGGGCAAACATG---TGGCACGGCGGCAGCGCCATCTTCTTCAGGTCGGC 2572 Query 30118 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTC 30174 |||||||| |||| || ||||||||||| || | ||||||||||||| || || | Sbjct 2571 CGGGTTCCACGCGCTCAGGATGATGCGCCGATCGTACGGGTTGTTCCTGAGCTTGTGGAC 2512 Query 30175 CACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTA 30234 || || |||||| || || ||| |||| |||||| |||||| ||| ||| Sbjct 2511 AACCTCGGC---CAGCTGGTCGACGCCCTGGCCCGTGTAGTCGGCCCTCGCGTCGACGTA 2455 Query 30235 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30294 ||| || || || |||| |||||||||||||||||| || |||||||| || | || | Sbjct 2454 CTCGGCGCCAAAGTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCGGCCTCGCG 2395 Query 30295 GTGCTCGAAGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTA 30353 ||| | |||||| | |||| | | || | || |||||| ||||||||||||| | Sbjct 2394 GTG-GCCCAGCCCCACGCTGTCGAGGTACTCGCGAGAGCCGTTGCCGTCCCAGATCTTGA 2336 Query 30354 CCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGAC------CCTCTGACGAACCACAGCA 30407 | |||| || ||||| |||| | ||| || || ||||||||||| Sbjct 2335 CGCCCTGTTCCGAGAG------GGAGAGCGACGACGTCTCGCCCGAGATGAACCACAGCA 2282 Query 30408 GCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 |||| | | ||| |||||| ||||| | |||||| |||||||| || Sbjct 2281 GCTCGGCGAGGACCGCCTTCTGGAAGACGCGCTTGGTTGTGAGGAGCGG 2233 Score = 116 bits (128), Expect = 3e-21 Identities = 187/264 (71%), Gaps = 5/264 (2%) Strand=Plus/Minus Query 29783 AAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACC--CTCCTG-TTTATCCTCAGTGTG 29839 || ||||| |||| || |||| | ||| | || |||| | |||||| ||| | Sbjct 2993 AAGTCCTCGACCTTCCAGCCGTCTATGCTGCCGCCCGTCTCCCGCTTTATCTCCAGCTCG 2934 Query 29840 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAG 29899 || ||| | ||||||||||| ||||| | |||||| || |||| || |||| Sbjct 2933 GGGAAGTCGCGCGGCTCCCTCTCCAGCTGCACCCTCAGCGCGTCGACGTGGTCGGCGTAG 2874 Query 29900 ACGTGAGCGTCTCCCAGGTTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 29958 ||||| ||||| |||| | ||| | || || ||||| | || || |||||| || Sbjct 2873 ACGTGGGCGTCGCCCATGACGTGCGTCAGGCTG-CCCGGGACGAGGTCGCAGACGTGCGC 2815 Query 29959 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 30018 ||||||| ||| || || ||||||||||||||||| ||||| || || || |||||||| Sbjct 2814 GATCATGTGCGTCAGCAGCGAGTAGCTGGCGATGTTGAAGGGGACGCCCAGGCCCATGTC 2755 Query 30019 CCCCGACCTCTGGTAGAGCTGACA 30042 | || | ||| || ||||| || Sbjct 2754 GCAGGAGCGCTGATACAGCTGGCA 2731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406244133567144