Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq5359 116 3e-21 >seq5359 Length=3099 Score = 116 bits (128), Expect = 3e-21 Identities = 258/380 (68%), Gaps = 8/380 (2%) Strand=Plus/Plus Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282 ||||| || || || || || || | | ||||| || ||| ||||||||||||||| Sbjct 2233 CCGCTCCTCACAACCAAGCGCGTCTTCCAGAAGGCGGTCCTCGCCGAGCTGCTGTGGTTC 2292 Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCT 34342 | ||| | ||| | |||||| | ||| || ||||||||||||| Sbjct 2293 ATCTCGGGCGAGACGTCGTCGCTCTCCCTCTCGGAACAGGGCGTCAAGATCTGGGACGGC 2352 Query 34343 CACGGGTCTCGAGACTTTCTGGACAAGCG-GGGGTTC--CCATCTCGGGAGGAGGGCGAC 34399 |||| ||||| || | || |||| ||| |||| | ||| | || ||| |||||| Sbjct 2353 AACGGCTCTCGCGAGTACCTCGACA-GCGTGGGGCTGGGCCACCGCG--AGGCCGGCGAC 2409 Query 34400 TTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGA- 34458 ||||||| || ||||||||||||||| | |||||||| || ||||| || | |||| Sbjct 2410 CTGGGCCCCGTGTACGGGTTCCAGTGGCGGCACTTTGGCGCCGAGTA-CGTCGACGCGAG 2468 Query 34459 AGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCG 34518 || ||||| |||| ||||| | ||||||||| | || || ||| | | | Sbjct 2469 GGCCGACTACACGGGCCAGGGCGTCGACCAGCTGGCCGAGGTTGTCCACAAGCTCAGGAA 2528 Query 34519 GAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGAT 34578 ||||| | || | | ||| | || |||||||||||||| || || ||| Sbjct 2529 CAACCCGTACGATCGGCGCATCATCCTGAGCGCGTGGAACCCGGCCGACCTGAAGAAGAT 2588 Query 34579 GGCGCTCCCCCCGTGCCACA 34598 |||||| || |||||||||| Sbjct 2589 GGCGCTGCCGCCGTGCCACA 2608 Score = 116 bits (128), Expect = 3e-21 Identities = 258/380 (68%), Gaps = 8/380 (2%) Strand=Plus/Minus Query 6747 TGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGA 6806 |||||||||| || ||||||||| || || |||||||||||||| || | || Sbjct 2608 TGTGGCACGGCGGCAGCGCCATCTTCTTCAGGTCGGCCGGGTTCCACGCGCTCAGGATGA 2549 Query 6807 TCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCGCTC 6866 | | | || | ||||| | | | ||| || || | ||||||||| | | Sbjct 2548 TGCGCCGATCGTACGGGTTGTTCCTGAGCTTGTGGACAACCTCGGCCAGCTGGTCGACGC 2489 Query 6867 CCTGTCCCGAATAGTCCGCT-TCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGG 6925 |||| |||| ||||| || |||| | || ||||| || |||||||| | ||||||| Sbjct 2488 CCTGGCCCGTGTAGTCGGCCCTCGCGTCGACG-TACTCGGCGCCAAAGTGCCGCCACTGG 2430 Query 6926 AACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGG--GAACCCC-CGCTTGTCC 6982 |||||||| || ||||||| |||||| ||| || | ||| | |||| ||| |||| Sbjct 2429 AACCCGTACACGGGGCCCAGGTCGCCGGCCT--CGCGGTGGCCCAGCCCCACGC-TGTCG 2373 Query 6983 AGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACGAGAGCTCCTTG 7042 || | || ||||| |||| ||||||||||||| || ||| | |||||| Sbjct 2372 AGGTACTCGCGAGAGCCGTTGCCGTCCCAGATCTTGACGCCCTGTTCCGAGAGGGAGAGC 2313 Query 7043 GTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCTTCCAGTACACA 7102 | ||| | ||| | ||||||||||||||| ||| || ||||| | | || Sbjct 2312 GACGACGTCTCGCCCGAGATGAACCACAGCAGCTCGGCGAGGACCGCCTTCTGGAAGACG 2253 Query 7103 CGTTTCGTCGTCAGCAGCGG 7122 || || || || || ||||| Sbjct 2252 CGCTTGGTTGTGAGGAGCGG 2233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448187416907040