Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq11228 125 2e-23 seq4985 105 2e-17 seq11305 87.8 4e-12 >seq11228 Length=3802 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || || || || ||||||| ||||| || | || || | |||||| Sbjct 358 AGCACCAAGTGCAGCGTCGACTCCTTTTGGATGTTGTAGTCAGACAGTGTCCGGCCATCT 299 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| |||||||| ||||| ||||| ||||| || || || || |||||||| Sbjct 298 TCCAACTGCTTGCCAGCGAAAATAAGACGTTGCTGGTCTGGTGGGATGCCCTCCTTGTCC 239 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||| |||||||| | || || || | ||||||||| Sbjct 238 TGAATCTTAGACTTGACGTTGTCGATTGTGTCTGATGACTCGACTTCAAGAGTGATCGTC 179 Query 225682 TTGCCCGTCAAAGTTTT 225698 || |||||||| || || Sbjct 178 TTTCCCGTCAAGGTCTT 162 Score = 109 bits (120), Expect = 1e-18 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||||||||| ||||| || |||| ||||| || | | |||| ||||| Sbjct 130 AGGACCAGGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCATCC 71 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| || || || ||||| || ||||| || |||||||| Sbjct 70 TCAAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 11 Query 225622 TGGATCTT 225629 |||||||| Sbjct 10 TGGATCTT 3 >seq4985 Length=7965 Score = 105 bits (116), Expect = 2e-17 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || |||||||| ||||| || || |||| ||||| |||| | || Sbjct 7817 ACGCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT 7876 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| || |||||||| || || || ||||| || ||||| || Sbjct 7877 GCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCC 7936 Query 225612 TTCCTTGTCTTGGATCTT 225629 ||||||||| |||||||| Sbjct 7937 TTCCTTGTCCTGGATCTT 7954 >seq11305 Length=537 Score = 87.8 bits (96), Expect = 4e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 7652 TAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTAC 7711 ||||| |||||| ||||||||||| || ||||||||||| || ||||||||||||||| Sbjct 282 TAATGGTTGGTGGCCCTGATATGGCATTCCCAAGGCTTAATAACATAAGTTTTTGATTAT 341 Query 7712 TACCGCCT 7719 |||||||| Sbjct 342 TACCGCCT 349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192326732327108