Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq5359 156 3e-33 >seq5359 Length=3099 Score = 156 bits (172), Expect = 3e-33 Identities = 282/408 (69%), Gaps = 26/408 (6%) Strand=Plus/Minus Query 27328 ACGTAAAACTG---ACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 27384 ||||||||||| | | ||| |||||||| || || ||||| || ||| Sbjct 2627 ACGTAAAACTGGGCAAACATG---TGGCACGGCGGCAGCGCCATCTTCTTCAGGTCGGCC 2571 Query 27385 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTCC 27441 |||||||| |||| || ||||||||||| || | ||||||||||||| || || | Sbjct 2570 GGGTTCCACGCGCTCAGGATGATGCGCCGATCGTACGGGTTGTTCCTGAGCTTGTGGACA 2511 Query 27442 ACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTAC 27501 || || |||||| || || ||| |||| |||||| ||||| ||| |||| Sbjct 2510 ACCTCGGC---CAGCTGGTCGACGCCCTGGCCCGTGTAGTCGGCCCTCGCGTCGACGTAC 2454 Query 27502 TCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTG 27561 || || || || |||| ||| |||||||||||||| || |||||||| || | || | | Sbjct 2453 TCGGCGCCAAAGTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCGGCCTCGCGG 2394 Query 27562 TGCTCGAAGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 27620 || | |||||| | |||| | | || | || |||||| ||||||||||||| || Sbjct 2393 TG-GCCCAGCCCCACGCTGTCGAGGTACTCGCGAGAGCCGTTGCCGTCCCAGATCTTGAC 2335 Query 27621 CCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGAC------CCTCTGACGAACCACAGCAG 27674 |||| || ||||| |||| | ||| || || |||||||||||| Sbjct 2334 GCCCTGTTCCGAGAG------GGAGAGCGACGACGTCTCGCCCGAGATGAACCACAGCAG 2281 Query 27675 CTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 ||| | | ||| |||||| ||||| | |||||| |||||||| || Sbjct 2280 CTCGGCGAGGACCGCCTTCTGGAAGACGCGCTTGGTTGTGAGGAGCGG 2233 Score = 120 bits (132), Expect = 2e-22 Identities = 188/264 (71%), Gaps = 5/264 (2%) Strand=Plus/Minus Query 27049 AAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACC--CTCCTG-TTTATCCTCAGTGTG 27105 || ||||| |||| || |||| | ||| | || |||| | |||||| ||| | Sbjct 2993 AAGTCCTCGACCTTCCAGCCGTCTATGCTGCCGCCCGTCTCCCGCTTTATCTCCAGCTCG 2934 Query 27106 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAG 27165 || ||| | ||||||||||| ||||| | |||||| || ||||| || |||| Sbjct 2933 GGGAAGTCGCGCGGCTCCCTCTCCAGCTGCACCCTCAGCGCGTCGACGTGGTCGGCGTAG 2874 Query 27166 ACGTGAGCGTCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 27224 ||||| ||||| |||| | ||| | || || ||||| | || || |||||| || Sbjct 2873 ACGTGGGCGTCGCCCATGACGTGCGTCAGGCTG-CCCGGGACGAGGTCGCAGACGTGCGC 2815 Query 27225 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 27284 ||||||| ||| || || ||||||||||||||||| ||||| || || || |||||||| Sbjct 2814 GATCATGTGCGTCAGCAGCGAGTAGCTGGCGATGTTGAAGGGGACGCCCAGGCCCATGTC 2755 Query 27285 CCCCGACCTCTGGTAGAGCTGACA 27308 | || | ||| || ||||| || Sbjct 2754 GCAGGAGCGCTGATACAGCTGGCA 2731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369446935916042