Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq11228 170 4e-37 seq4985 120 6e-22 seq13121 96.9 7e-15 seq2165 84.2 5e-11 seq1754 84.2 5e-11 >seq11228 Length=3802 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| ||||| ||||| |||| || | ||| || ||||||||||||||||||| Sbjct 373 CCACCCCGCAGACGAAGCACCAAGTGCAGCGTCGACTCCTTTTGGATGTTGTAGTCAGAC 314 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || |||||||| || | || || || || || || | |||||| ||||| || Sbjct 313 AGTGTCCGGCCATCTTCCAACTGCTTGCCAGCGAAAATAAGACGTTGCTGGTCTGGTGGG 254 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| || ||||| | || ||| | ||||| ||||| || | |||||| Sbjct 253 ATGCCCTCCTTGTCCTGAATCTTAGACTTGACGTTGTCGATTGTGTCTGATGACTCGACT 194 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||||||||| |||||||| ||||| || || |||||||| Sbjct 193 TCAAGAGTGATCGTCTTTCCCGTCAAGGTCTTGACAAAGATCTGCAT 147 Score = 123 bits (136), Expect = 5e-23 Identities = 113/143 (79%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| ||||| || ||||| || | || ||| || |||||||||||||| | Sbjct 145 CCACCACGGAGGCGGAGGACCAGGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCCGAG 86 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||||||||| || || || || |||||||||| ||| || |||||| ||| Sbjct 85 AGGGTTCGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGA 26 Query 282993 ATACCCTCCTTGTCTTGGATCTT 283015 || ||||||||||| |||||||| Sbjct 25 ATGCCCTCCTTGTCCTGGATCTT 3 >seq4985 Length=7965 Score = 120 bits (132), Expect = 6e-22 Identities = 113/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || ||||| || | ||| || || |||||||||||||| | Sbjct 7811 ACCACCACGCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 7870 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| || || || ||||| ||||||| ||| || ||||| || Sbjct 7871 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGG 7930 Query 282992 AATACCCTCCTTGTCTTGGATCTT 283015 ||| || |||||||| |||||||| Sbjct 7931 AATGCCTTCCTTGTCCTGGATCTT 7954 >seq13121 Length=2348 Score = 96.9 bits (106), Expect = 7e-15 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | || || ||||||||||| || || || ||||| |||||| Sbjct 103 TTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 44 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCT 283014 || || || ||||| ||||| ||||||||||| ||||||| Sbjct 43 AATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCT 1 >seq2165 Length=4774 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| |||||||| | || || | || || ||||| || | |||||| ||| Sbjct 3 CCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCTATGGTGTCGGAGGATTCGACCTCG 62 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 63 AGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 106 >seq1754 Length=10432 Score = 84.2 bits (92), Expect = 5e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 316982 CGTCGAGGTCATGCTCAACATATGCAGTTTTCAGAATATCCTTCGTCGGGAACCCTTCCA 317041 |||| ||||| |||||||| | |||| || | || | | ||||| || || | Sbjct 5616 CGTCAAGGTCGTGCTCAACGAACACAGTCTTGACCTCGCTCTGCTTGGGGAAACCCTCGA 5557 Query 317042 ACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAA 317101 || |||| || || | ||| || || ||||| || ||||| ||||| ||||| | Sbjct 5556 CTTGCTCGTTGTTGATGGCACGCATGAGGGTGGACTTTCCGGCACCGTTGGGACCGCAGA 5497 Query 317102 GACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACCAC 317161 |||| || ||| || ||| || | ||||||||||| || || ||||| ||| Sbjct 5496 GACCGTAACGACGGCCACGCTTGAGGCGGATGCGGGTGTTGTTGAGCAGGATCTTGGCAC 5437 Query 317162 CATATGCCAGAGAGAACTCACAATCACACAGGTC 317195 | || || || ||||||||||| || || ||||| Sbjct 5436 CGTAGGCGAGCGAGAACTCACACTCGCAGAGGTC 5403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046559729367828