Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20helianthi_20[genbank_20GCA_5F001702395.1_202016-08-10] 13,382 sequences; 46,487,794 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq4985 138 1e-27 seq13121 105 6e-18 >seq4985 Length=7965 Score = 138 bits (152), Expect = 1e-27 Identities = 118/146 (81%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || || || || || || | |||||| || || ||| ||||||||| ||||| |||||| Sbjct 7809 CCACCACCACGCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 7868 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 ||||||||||| |||| |||||||||||||||||||| ||||| ||||| ||||| | | Sbjct 7869 GAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGG 7928 Query 41753 GGAACGCTCTCCTTGTCCATGATTTT 41778 |||| || ||||||||| ||| || Sbjct 7929 GGAATGCCTTCCTTGTCCTGGATCTT 7954 >seq13121 Length=2348 Score = 105 bits (116), Expect = 6e-18 Identities = 82/98 (84%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||||||||||| || | || || ||||||||||||||||| | Sbjct 105 CCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 46 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 ||| ||||| ||||| | ||||| || |||||||||| Sbjct 45 TCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462226668098400