Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq556 217 2e-51
>seq556
Length=684303
Score = 217 bits (240), Expect = 2e-51
Identities = 299/414 (72%), Gaps = 3/414 (1%)
Strand=Plus/Plus
Query 145866 CGCCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCG 145924
|| |||||| ||||| ||| | | |||||| |||||||| ||||| |||||| |
Sbjct 379774 CGACACGTAAAACTGCGCAAAC-ATGTGGCAAGGCGGCAGCGCCATCTTCTTCAGGTCGG 379832
Query 145925 CCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTA 145984
|||||||||| ||| | | || || | || | | ||||| ||||| || |
Sbjct 379833 CCGGGTTCCACGCGCTCATGATGATGCGCCGGTCGTACGGGTTGTGCTTGAGCTTGTGGA 379892
Query 145985 TCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACG 146044
||| || |||||||| |||||||| ||| ||| || | || | ||| ||||||
Sbjct 379893 TCACCTCGGCCAGCTGGTCGACGCCCTGGCCCGTGTAGTCGGCTTTCGCGTCGACGTACT 379952
Query 146045 CGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGT 146104
|||||||||| |||| ||||||||||||||| || || |||||||| || | ||| | ||
Sbjct 379953 CGGCCCCGAAATGCCGCCACTGGAACCCGTACACTGGGCCCAGGTCGCCCGCCTCGCGGT 380012
Query 146105 GCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGC 146164
| |||||||| | | | ||||| | || || ||||||||| ||||||||||||||||||
Sbjct 380013 GGCCCAGCCCCACGCTGTCGAGGTACTCGCGAGACCCGTTGCCGTCCCAGATCTTGACGC 380072
Query 146165 CCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGA 146224
|| | ||||| || ||| ||| ||||||||| ||||||||| |||
Sbjct 380073 CCTGTTCTGAGAGGGACAGCGACGACGTCTCGCCCGCGATGAACCATAGCAGCTCTGCGA 380132
Query 146225 GGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAG-GGGGAACTGGCCCCGC 146277
|||| || || |||||| | ||| |||||||| || ||| || ||| || ||
Sbjct 380133 GGACGGCCTTCTGGAAGACGCGCTTTGTGGTCAGGAGCGGGTAAATGGGCCTGC 380186
Score = 138 bits (152), Expect = 1e-27
Identities = 221/316 (70%), Gaps = 5/316 (2%)
Strand=Plus/Plus
Query 145540 ACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCC 145599
|||| ||||| ||| | || | | |||||||| || |||| | | | ||||||||
Sbjct 379367 ACCGACATCTTCATCGCAATCGTCTTGTGGGGGTTATACCCCTTAACCTCGAAGTCCTCG 379426
Query 145600 GCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGG----ATCCTGAGCCTGGGAAAGGG 145655
|| | || | |||||| | || ||| ||| | ||| ||| ||||||
Sbjct 379427 ACCTTCCAGCCGTCTATG-CTGCCGCCCTTCTCCCGCTTAATCTCCAGCTCGGGAAATTC 379485
Query 145656 CCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGC 145715
|| || ||| |||||| | | |||| | || ||||||| |||||||||||
Sbjct 379486 GCGCGGCTCCCTCTCCAGCTGCACCCTCAGCGCGTCGACGTGGTCCGCATAGACGTGCGC 379545
Query 145716 GTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTA 145775
||| |||| |||||| | | | ||||| ||||| | | ||| |||| |||||
Sbjct 379546 GTCGCCCATGACGTGCGTCAGGCTGCCGGGGACGAGGTCACACACGTGCGCGATCATGTG 379605
Query 145776 GGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCG 145835
|||||||| ||||||||||| || ||||| || || ||||| |||||||| | |||||
Sbjct 379606 CGTCAGCAGCGAGTAGCTGGCGATATTGAAAGGGACGCCCAGGCCCATGTCGCAGGAGCG 379665
Query 145836 CTGGTACAGCTGGCAG 145851
||||||||||||||||
Sbjct 379666 CTGGTACAGCTGGCAG 379681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590069534679400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |