Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq556 217 2e-51 >seq556 Length=684303 Score = 217 bits (240), Expect = 2e-51 Identities = 299/414 (72%), Gaps = 3/414 (1%) Strand=Plus/Plus Query 145866 CGCCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCG 145924 || |||||| ||||| ||| | | |||||| |||||||| ||||| |||||| | Sbjct 379774 CGACACGTAAAACTGCGCAAAC-ATGTGGCAAGGCGGCAGCGCCATCTTCTTCAGGTCGG 379832 Query 145925 CCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTA 145984 |||||||||| ||| | | || || | || | | ||||| ||||| || | Sbjct 379833 CCGGGTTCCACGCGCTCATGATGATGCGCCGGTCGTACGGGTTGTGCTTGAGCTTGTGGA 379892 Query 145985 TCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACG 146044 ||| || |||||||| |||||||| ||| ||| || | || | ||| |||||| Sbjct 379893 TCACCTCGGCCAGCTGGTCGACGCCCTGGCCCGTGTAGTCGGCTTTCGCGTCGACGTACT 379952 Query 146045 CGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGT 146104 |||||||||| |||| ||||||||||||||| || || |||||||| || | ||| | || Sbjct 379953 CGGCCCCGAAATGCCGCCACTGGAACCCGTACACTGGGCCCAGGTCGCCCGCCTCGCGGT 380012 Query 146105 GCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGC 146164 | |||||||| | | | ||||| | || || ||||||||| |||||||||||||||||| Sbjct 380013 GGCCCAGCCCCACGCTGTCGAGGTACTCGCGAGACCCGTTGCCGTCCCAGATCTTGACGC 380072 Query 146165 CCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGA 146224 || | ||||| || ||| ||| ||||||||| ||||||||| ||| Sbjct 380073 CCTGTTCTGAGAGGGACAGCGACGACGTCTCGCCCGCGATGAACCATAGCAGCTCTGCGA 380132 Query 146225 GGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAG-GGGGAACTGGCCCCGC 146277 |||| || || |||||| | ||| |||||||| || ||| || ||| || || Sbjct 380133 GGACGGCCTTCTGGAAGACGCGCTTTGTGGTCAGGAGCGGGTAAATGGGCCTGC 380186 Score = 138 bits (152), Expect = 1e-27 Identities = 221/316 (70%), Gaps = 5/316 (2%) Strand=Plus/Plus Query 145540 ACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCC 145599 |||| ||||| ||| | || | | |||||||| || |||| | | | |||||||| Sbjct 379367 ACCGACATCTTCATCGCAATCGTCTTGTGGGGGTTATACCCCTTAACCTCGAAGTCCTCG 379426 Query 145600 GCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGG----ATCCTGAGCCTGGGAAAGGG 145655 || | || | |||||| | || ||| ||| | ||| ||| |||||| Sbjct 379427 ACCTTCCAGCCGTCTATG-CTGCCGCCCTTCTCCCGCTTAATCTCCAGCTCGGGAAATTC 379485 Query 145656 CCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGC 145715 || || ||| |||||| | | |||| | || ||||||| ||||||||||| Sbjct 379486 GCGCGGCTCCCTCTCCAGCTGCACCCTCAGCGCGTCGACGTGGTCCGCATAGACGTGCGC 379545 Query 145716 GTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTA 145775 ||| |||| |||||| | | | ||||| ||||| | | ||| |||| ||||| Sbjct 379546 GTCGCCCATGACGTGCGTCAGGCTGCCGGGGACGAGGTCACACACGTGCGCGATCATGTG 379605 Query 145776 GGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCG 145835 |||||||| ||||||||||| || ||||| || || ||||| |||||||| | ||||| Sbjct 379606 CGTCAGCAGCGAGTAGCTGGCGATATTGAAAGGGACGCCCAGGCCCATGTCGCAGGAGCG 379665 Query 145836 CTGGTACAGCTGGCAG 145851 |||||||||||||||| Sbjct 379666 CTGGTACAGCTGGCAG 379681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590069534679400