Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq756 113 1e-19
>seq756
Length=226783
Score = 113 bits (124), Expect = 1e-19
Identities = 267/399 (67%), Gaps = 22/399 (6%)
Strand=Plus/Minus
Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060
|| ||||| |||| ||| |||| || ||||| || || |||||||| || ||||| ||
Sbjct 38214 CTCCCTCACATGCTCTTCTACGGCCCGCCCGGTACTGGAAAGACGTCCACAATCCTTGCT 38155
Query 254061 CTGGCCC-GAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGC 254119
|| ||| | | | | ||| | | | | ||| | || || |||||||| || ||
Sbjct 38154 CTTGCCAAGGAGCTTTATGGTCCTGAGTT-CGTGAAGCAACGTGTTCTCGAGCTCAATGC 38096
Query 254120 TTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAG-ACTT------TCTCCA 254172
||||||||||||||| | | |||| || || ||| ||||| |||| | | ||
Sbjct 38095 TTCTGACGAACGCGGTATCTCCATCGTACGGGAGAAGGTCAAGGACTTCGCGCGTATGCA 38036
Query 254173 AGATGTCGATTTCGTCG------TTCCAACCCGGCTGTCCG------CCTTTCAAGCTCG 254220
| || | | | | | | || || | | |||| || |||||| ||
Sbjct 38035 -GTTGACCAACCCACCCGCGGGCTACAAATCCCGTTATCCGTGCCCACCATTCAAGATCA 37977
Query 254221 TGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGA 254280
| || ||||||||||| |||| |||||| || || ||| ||| |||||||| ||||
Sbjct 37976 TCATTCTGGACGAGGCCGACAGCATGACACAGGATGCCCAGAGCGCGCTCCGCCGCACGA 37917
Query 254281 TGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCA 254340
|||| || || | | ||||| || ||||| | |||||||||||| || ||||
Sbjct 37916 TGGAAACATACAGCAAGATTACGCGGTTCTGCCTCATCTGCAACTACGTGACGCGCATCA 37857
Query 254341 TCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379
||| ||| ||||| ||| ||| ||| || || ||||
Sbjct 37856 TCGACCCCCTGGCAAGTCGTTGCAGCAAATTCCGCTTCA 37818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073752848732480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |