Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq756 113 1e-19 >seq756 Length=226783 Score = 113 bits (124), Expect = 1e-19 Identities = 267/399 (67%), Gaps = 22/399 (6%) Strand=Plus/Minus Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060 || ||||| |||| ||| |||| || ||||| || || |||||||| || ||||| || Sbjct 38214 CTCCCTCACATGCTCTTCTACGGCCCGCCCGGTACTGGAAAGACGTCCACAATCCTTGCT 38155 Query 254061 CTGGCCC-GAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGC 254119 || ||| | | | | ||| | | | | ||| | || || |||||||| || || Sbjct 38154 CTTGCCAAGGAGCTTTATGGTCCTGAGTT-CGTGAAGCAACGTGTTCTCGAGCTCAATGC 38096 Query 254120 TTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAG-ACTT------TCTCCA 254172 ||||||||||||||| | | |||| || || ||| ||||| |||| | | || Sbjct 38095 TTCTGACGAACGCGGTATCTCCATCGTACGGGAGAAGGTCAAGGACTTCGCGCGTATGCA 38036 Query 254173 AGATGTCGATTTCGTCG------TTCCAACCCGGCTGTCCG------CCTTTCAAGCTCG 254220 | || | | | | | | || || | | |||| || |||||| || Sbjct 38035 -GTTGACCAACCCACCCGCGGGCTACAAATCCCGTTATCCGTGCCCACCATTCAAGATCA 37977 Query 254221 TGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGA 254280 | || ||||||||||| |||| |||||| || || ||| ||| |||||||| |||| Sbjct 37976 TCATTCTGGACGAGGCCGACAGCATGACACAGGATGCCCAGAGCGCGCTCCGCCGCACGA 37917 Query 254281 TGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCA 254340 |||| || || | | ||||| || ||||| | |||||||||||| || |||| Sbjct 37916 TGGAAACATACAGCAAGATTACGCGGTTCTGCCTCATCTGCAACTACGTGACGCGCATCA 37857 Query 254341 TCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 ||| ||| ||||| ||| ||| ||| || || |||| Sbjct 37856 TCGACCCCCTGGCAAGTCGTTGCAGCAAATTCCGCTTCA 37818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073752848732480