Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq1 123 2e-23
seq512 84.2 2e-11
>seq1
Length=1124325
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||| ||| ||||||||| |||||||||||| || ||| |||| ||
Sbjct 67676 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 67617
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| |||| ||||| ||||| || || | || |||||||||
Sbjct 67616 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGG 67557
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||||||||| | ||| || ||||||
Sbjct 67556 ATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTG 67497
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
||||| || |||||||| ||||| |||||| ||
Sbjct 67496 CCCGTGAGGGTCTTCACGAAGATCTGCATGATG 67464
>seq512
Length=287951
Score = 84.2 bits (92), Expect = 2e-11
Identities = 149/214 (70%), Gaps = 10/214 (5%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCG----TC 45183
|||| ||||||||| |||||||| ||||||||||| || | ||| || ||
Sbjct 17973 ACCAGGTGCAGCGTCGATTCCTTCTGGATGTTGTAGTC----AGATAGCGTCCGGCCATC 18028
Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
|||| || || || ||||| || | || || ||||| || || | |||||||||||
Sbjct 18029 TTCCAACTGCTTGCCAGCGAAAATGAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTC 18088
Query 45244 CGCAATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCG 45302
| ||| || ||| || | | || | ||||| ||| ||||| | || ||||
Sbjct 18089 CTGAATCTTAGACTTGAC-GTTGTCAATCGTGTCCGATGACTCGACCTCAAGCGTGATCG 18147
Query 45303 TCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||||||||||| ||||| || || || |||||
Sbjct 18148 TCTTGCCCGTCAAGGTCTTGACGAAAATCTGCAT 18181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395070457245685
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |