Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq334 251 6e-62
seq279 156 4e-33
seq512 105 6e-18
seq1 102 7e-17
>seq334
Length=742376
Score = 251 bits (278), Expect = 6e-62
Identities = 632/956 (66%), Gaps = 6/956 (1%)
Strand=Plus/Plus
Query 23021 GCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCG 23080
|| || ||||| | ||||| || || ||||| ||| || | |||||| | || ||
Sbjct 395198 GCAATGGAGGCCAAGTTGCACACCGCGACCTCATCTGGGGCAGAGTACTCAATGATCTCA 395257
Query 23081 GTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCAC 23140
|| || |||||| | || || |||| || |||||||||| || || |||
Sbjct 395258 GTGCAAAGATTGGAGCTTCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTCCGGTTGGCG 395317
Query 23141 GAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGC 23200
|||||||| |||||| | || |||| ||||| ||| | ||||| || || |
Sbjct 395318 TGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCAGTCTGGGCCTCGAGAATGGCATAC 395377
Query 23201 CACATAGTCTGAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTA 23259
|| | |||| || | | ||| || | | || || | |||||||| | |||
Sbjct 395378 CATAGCTTCTGGGCCTTCATG-GTCTTGCGACCACGACCCTCCTTCTCGTACTGCTCGTA 395436
Query 23260 CAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACAT 23319
| || ||||| || ||||||| |||||||| ||||| || | | | || |||||
Sbjct 395437 GAGAGCCTCAAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGACACTCGTTAGGGCACAT 395496
Query 23320 GAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGC 23379
|| |||| || || || || || |||| |||||||| || ||||| || ||
Sbjct 395497 CAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAAAAGATCGGGAATCCAGAGGGC 395556
Query 23380 GTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAA 23439
||| || || ||||| || | |||||| || ||| ||||| || || | |||
Sbjct 395557 AAGGAAAAGATCACGGGCTCGGATCTCCTCCTTACCGTGATTCTTGCGCAGGTCAAGAAA 395616
Query 23440 GTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATT 23499
|| || || || || ||||| ||||| ||||| | || || || || || | ||| ||
Sbjct 395617 CTCGAAGACATCGGCGTGCCATGGCTCAAGGTAGATAGCGAAGGCACCGGGACGCTTGTT 395676
Query 23500 GCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACC 23559
||| ||||| |||||||| ||||| ||||||||| | || | ||||| || || ||
Sbjct 395677 GCCACCCTGGTCGACGTATCGGGCGGTGTTGTTGAAGACCCGCAGCATTGGGGTGATGCC 395736
Query 23560 GTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTG 23619
|| || | ||| ||| || | || || | || || | | ||| ||||
Sbjct 395737 ATTAGAGGTACCGTTGGTGCCAGCGATGTATGAGCCGGTGGCACGGATGCGGTGCACGTT 395796
Query 23620 GAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGAT 23679
| ||| || || || || || || ||||| || || || || ||||| || ||
Sbjct 395797 CAGACCAATTCCACCCGCCATCTTGGAGATCATAGCACAAGTCTTTAGGGTGTCATAAAT 395856
Query 23680 GCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGG 23739
|||||| ||||||||||| || | |||| | ||| || || |||| || | | |||
Sbjct 395857 GCCCTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCATGATGACAGCTGGGGCTGGGG 395916
Query 23740 CGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATT 23799
|| | || ||||| ||| ||| ||| || || ||| | || ||||| || ||
Sbjct 395917 AGTGCCAGCATTGAACAATGTGGGGGAGGCATGTGTGAAGAACTTGTTTGACATCAGGTT 395976
Query 23800 GTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCAT 23859
||| || || ||| | || | || ||||| ||||||| ||||| ||||| ||
Sbjct 395977 GTATGTCTCAATGACCCTTTCGACATCGTCTCCCCAGATACCGACAGCGACACGCATGAT 396036
Query 23860 CATGTATTGAGGTCTCTCGAC--CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGC 23917
||||| || || | |||||| | | | || | | |||| || |||||||| | |
Sbjct 396037 CATGTGCTGTGGCCGCTCGACAACTTTA--CCATCGAGCTTGAGGAGGTATGAACGCTCC 396094
Query 23918 ATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGA 23973
| || || || || ||||| | ||| ||||||||| |||| || ||||||||
Sbjct 396095 AGGGTCTTGAAGCCGAAATATTGGTAGCCAAAGTCACGGTCGTAAACAATGGCCGA 396150
>seq279
Length=349471
Score = 156 bits (172), Expect = 4e-33
Identities = 331/487 (68%), Gaps = 14/487 (3%)
Strand=Plus/Minus
Query 57914 CAAGAAGGCAGAGTGGTCAATCAAATGGATAAAA-AGCGCCACGGCCACGTTCGCCGAGA 57972
||||||||| || ||| | |||| ||||| | | ||| | | |||| | |||| ||
Sbjct 263117 CAAGAAGGCCGACTGGGCTCTCAAGTGGATCCAGGACCGCGA-GTCCACCTACGCCCAGC 263059
Query 57973 GGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATAT 58032
| || | || ||||| |||||||| || || ||||| ||| || || | || |
Sbjct 263058 GACTGGTTGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGCGCATTCGCCTCTATTT 262999
Query 58033 TTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGC 58092
| ||| | ||||| || ||||| ||||| |||||||| || ||||||| | || || |
Sbjct 262998 TCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCTCCAACGAGCTCATTTCTC 262939
Query 58093 GCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAAC 58152
| || |||||||| || || || || || || || ||| ||||||| | | |||
Sbjct 262938 GTGATGAGGGTCTGCACACCGACTTCGCCTGTCTCCTGTTCTCTCACCTG----AGGAAC 262883
Query 58153 CGAC---GCGGG-ATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAG 58208
|| | || | | || || |||||| ||||||||||| ||||| || || || |||
Sbjct 262882 CGTCCAAGCAAGCAGCGTGTCCAGGACATCATCACCGAGGCTGTCGCCATTGAGAAGGAG 262823
Query 58209 TTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAG 58268
|| | ||||| || || || ||| | ||||| |||||| | | ||| ||
Sbjct 262822 TTCTTGACCGAGGCTCTGCCATGCGCCCTCCTCGGCATGAACTCCAACCTCATGAAGCAG 262763
Query 58269 TACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACA 58326
||||| ||||||||||||||| | || || ||| || | |||| || |||||
Sbjct 262762 TACATCGAGTTTGTTGCCGACCGTCTCCTGGTCGCTCTGGGCAACGAGAAGGT--TTACA 262705
Query 58327 ACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTT 58386
| || || || || || || ||| | ||||| |||| |||||||| ||||| |
Sbjct 262704 AGTCGTCGAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGTGGCAAGACCAACTTCT 262645
Query 58387 TCGAAAA 58393
| || ||
Sbjct 262644 TTGAGAA 262638
>seq512
Length=287951
Score = 105 bits (116), Expect = 6e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| ||||| |||| ||||| |||||||| | || || || | ||
Sbjct 18181 ATGCAGATTTTCGTCAAGACCTTGACGGGCAAGACGATCACGCTTGAGGTCGAGTCATCG 18122
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | ||||| | || ||||||||| || | || || ||||||
Sbjct 18121 GACACGATTGACAACGTCAAGTCTAAGATTCAGGACAAGGAGGGAATTCCACCAGACCAG 18062
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| ||||| || ||||||||||| ||||||||||| ||| | || || |||
Sbjct 18061 CAACGTCTCATTTTCGCTGGCAAGCAGTTGGAAGATGGCCGGACGCTATCTGACTACAAC 18002
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
|| || || |||||||| || || ||||| |||
Sbjct 18001 ATCCAGAAGGAATCGACGCTGCACCTGGTGCTT 17969
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||||||||| ||||| || || ||| |||| || || | ||
Sbjct 18409 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACCATTACCCTCGAGGTCGAGTCCTCA 18350
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || ||||||||| ||| | || || ||||||
Sbjct 18349 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 18290
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || || ||||| || ||| | || || || | ||| || |||
Sbjct 18289 CAGCGTCTGATCTTTGCTGGAAAGCAGCTCGAGGATGGGCGAACCCTCTCCGACTACAAC 18230
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || || ||||| |||||||| ||||| ||
Sbjct 18229 ATCCAGAAGGAATCTACTCTTCACCTGGTTCT 18198
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||| || |||||||| || |||||| | || || || | ||
Sbjct 18638 CATGCAGATCTTCGTGAAGACCCTCACAGGCAAGACCATCACCCTTGAGGTCGAGTCCTC 18579
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||| | |||| | ||||| | || ||||||||| ||| | || || |||||
Sbjct 18578 CGATACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCA 18519
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||| || || || || ||||| ||| | || ||| || | ||| || ||
Sbjct 18518 GCAGCGCCTTATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAA 18459
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||||||| || || || || ||||| || || | || | |||||||
Sbjct 18458 CATTCAAAAGGAGTCTACCCTCCATCTCGTCCTCCGTCTTCGTGGCGGTA 18409
>seq1
Length=1124325
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||| || || ||||| || |||||| | || || || | ||
Sbjct 67467 CATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTC 67526
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||||| |||| | ||||| | || ||||||||||||| | || || |||||
Sbjct 67527 CGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCA 67586
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||||||||| || ||||| ||||| ||| | || ||| || | ||| || ||
Sbjct 67587 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAA 67646
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||| || || || || || || || ||||| || | ||| | || |||
Sbjct 67647 CATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGCCTGCGCGGTGGT 67695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445760911501200
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