Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq334 165 1e-35
seq279 134 2e-26
>seq334
Length=742376
Score = 165 bits (182), Expect = 1e-35
Identities = 445/679 (66%), Gaps = 4/679 (1%)
Strand=Plus/Plus
Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATA 72033
|||||||| || || || ||||||| | ||| || || | | | || || |||||
Sbjct 395474 CCAGGACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATG 395533
Query 72034 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 72093
|| ||||| |||||||| || || | || ||||| | || || |||||| || ||
Sbjct 395534 AAAAGATCGGGAATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTACCG 395593
Query 72094 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 72153
|||||| || || || ||| | | | ||| | ||||| || || | ||| ||
Sbjct 395594 TGATTCTTGCGCAGGTCAAGAAACTCGAAGACATCGGCGTGCCATGGCTCAAGGTAGATA 395653
Query 72154 GCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 72213
|| | | || || || ||||| || ||||| || | ||||| |||||||| || |
Sbjct 395654 GCGAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCGGTGTTGTTGAAG 395713
Query 72214 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 72273
|| | || |||||| | || ||||| || | ||| ||||| || | ||| || ||
Sbjct 395714 ACCCGCAGCATTGGGGTGATGCCATTAGAGGTACCGTTGGTGCCAGCGATGTATGAGCCG 395773
Query 72274 CTGGCACGAATAT--TGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 72331
||||||| || ||| || | |||| ||||| || ||||| || ||||| | |
Sbjct 395774 GTGGCACGGATGCGGTGCACGTTCA--GACCAATTCCACCCGCCATCTTGGAGATCATAG 395831
Query 72332 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 72391
| || |||| || ||||| |||||||| || || || ||| |||||| | || |
Sbjct 395832 CACAAGTCTTTAGGGTGTCATAAATGCCCTCAATGCTGTCCTCCTTCATGTCGACGAGGA 395891
Query 72392 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 72451
| || |||| ||| | | ||| || ||||| || || || || || || || |
Sbjct 395892 AGCATGATGACAGCTGGGGCTGGGGAGTGCCAGCATTGAACAATGTGGGGGAGGCATGTG 395951
Query 72452 TAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGAT 72511
| || | || | |||| || ||||| |||||||| | ||| | ||| |
Sbjct 395952 TGAAGAACTTGTTTGACATCAGGTTGTATGTCTCAATGACCCTTTCGACATCGTCTCCCC 396011
Query 72512 GTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTA 72571
|| || || ||||||||||| | ||| ||||| || | || || | || || |
Sbjct 396012 AGATACCGACAGCGACACGCATGATCATGTGCTGTGGCCGCTCGACAACTTTACCATCGA 396071
Query 72572 TTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 72631
|| | | ||| || |||| || || || || ||||| | ||| |||||| |
Sbjct 396072 GCTTGAGGAGGTATGAACGCTCCAGGGTCTTGAAGCCGAAATATTGGTAGCCAAAGTCAC 396131
Query 72632 GTTCGTAAATAATAACCGA 72650
| ||||||| ||| ||||
Sbjct 396132 GGTCGTAAACAATGGCCGA 396150
Score = 118 bits (130), Expect = 1e-21
Identities = 324/493 (66%), Gaps = 5/493 (1%)
Strand=Plus/Plus
Query 70789 TCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATG 70848
|||| ||| | || ||||| ||||| | || || || | || || || |||||||||
Sbjct 394280 TCCTGGTCGACAGTGAACTGGATGGGTGCGGCAGCTGCCTGGGTGCGGAGGTAGTACATG 394339
Query 70849 CCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG-GAATAGCT 70907
|| || || |||||||| |||| ||| || ||||| || || | ||| || | |
Sbjct 394340 CCAGTCTTGAGACCGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATTGAT 394399
Query 70908 AGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 70967
|| || ||||| || || | |||||| |||||| |||||||| || | ||| ||
Sbjct 394400 -GGCTCCCTCATGTGGATGTTTAGAGACTGAGATTGATCAATGAAGGCACCACGGTCAGC 394458
Query 70968 AGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAAT 71027
|||||| | | || ||| | || | || ||||| | || || || | ||| ||
Sbjct 394459 AGCCATCTGCACAATGGTCCTCTGAGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGAT 394518
Query 71028 ATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTT 71084
||| | || | | | | | ||||||||||| ||| | || || || || | || ||
Sbjct 394519 ATCAGCCGGGATGCTAGGAATGTTCTGAATGGAACCATCCTCGGCGATGATACGGTTCTT 394578
Query 71085 GATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTAC 71144
|| | ||| ||| || ||| || | | | || ||||| ||| || || ||
Sbjct 394579 CATGGCCTCAGACCACAAGCCGAGCTCTGTCAGATCCCTGAGGAGCCAAGGGTTGACGAC 394638
Query 71145 TTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGA 71204
|| || || |||| | || | || ||| || || ||| || || || | |
Sbjct 394639 CTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAAAGCA 394698
Query 71205 CTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACT 71264
|||||| || |||| ||||| | || || ||||| ||||| ||||||| ||| | ||
Sbjct 394699 CTCATTGTTGCCCAGGATTTGCGACGTCGAAGCAGTGGGCATTGGTGCCAGCAACAAGCT 394758
Query 71265 ATTTCTAAGACCA 71277
|| | || ||||
Sbjct 394759 GTTGCGAACACCA 394771
>seq279
Length=349471
Score = 134 bits (148), Expect = 2e-26
Identities = 161/218 (74%), Gaps = 3/218 (1%)
Strand=Plus/Plus
Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115
|||| | ||| ||||| ||| ||||||||||||||| | | ||| | ||||||||
Sbjct 262899 AACAGGAGACAGGCGAAGTCGGTGTGCAGACCCTCATCACGAGAAATGAGCTCGTTGGAG 262958
Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175
|| || || || ||||| ||||||||||| || ||||| || ||||| || |||| |||
Sbjct 262959 AAGGTCAGGCCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATAGAGGCGAATGCGCCA 263018
Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CA 42232
|||||||| || || || || || ||||||| |||| || | || || |
Sbjct 263019 CTGAAGAAGATGCCCTCGACGGCAGCGAAGGCAACCAGTCGCTGGGCGTAGGTGGACTCG 263078
Query 42233 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 42270
| ||| || |||||||| ||||||| |||||||||||
Sbjct 263079 CGGTCCTGGATCCACTTGAGAGCCCAGTCGGCCTTCTT 263116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671130936598600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |