Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq512 122 2e-22
>seq512
Length=287951
Score = 122 bits (134), Expect = 2e-22
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|||||||| ||||| || || ||||| || || |||| || || || || || ||||||
Sbjct 18213 GTAGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGCCCATCCTCGAGCTGCTTTCCA 18272
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || | ||| || ||||| || || || || || ||||| ||||| | ||
Sbjct 18273 GCAAAGATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 18332
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| || | || ||||| || ||||| ||||| ||||| || ||
Sbjct 18333 ACATTGTCGATGGTGTCTGAGGACTCGACCTCGAGGGTAATGGTCTTGCCAGTCAGAGTC 18392
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 18393 TTGACGAAGATCTGCAT 18409
Score = 96.9 bits (106), Expect = 8e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | || ||||| ||||| || || ||||||||||| || | || ||
Sbjct 17969 AAGCACCAGGTGCAGCGTCGATTCCTTCTGGATGTTGTAGTCAGATAGCGTCCGGCCATC 18028
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||| | || || ||||| ||||| || | || || || || || ||||| || || ||
Sbjct 18029 TTCCAACTGCTTGCCAGCGAAAATGAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTC 18088
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
||||||||| | || || || || | || || | || ||||| || || || ||
Sbjct 18089 CTGAATCTTAGACTTGACGTTGTCAATCGTGTCCGATGACTCGACCTCAAGCGTGATCGT 18148
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| || || | || || || || ||||||||
Sbjct 18149 CTTGCCCGTCAAGGTCTTGACGAAAATCTGCAT 18181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151383868992380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |