Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq556 100 2e-16
>seq556
Length=684303
Score = 100 bits (110), Expect = 2e-16
Identities = 179/258 (69%), Gaps = 14/258 (5%)
Strand=Plus/Plus
Query 25669 GGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAA----GATC 25724
|||||||| |||| || |||||||| || ||| | ||||||| | ||| ||||
Sbjct 379835 GGGTTCCACGCGCTCATGATGATGCGCCGGTCGTACGGGTTGTGCTTGAGCTTGTGGATC 379894
Query 25725 --CGCGGTGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTG 25782
| ||| |||||| || || ||| |||| |||||| || || ||| |
Sbjct 379895 ACCTCGGC------CAGCTGGTCGACGCCCTGGCCCGTGTAGTCGGCTTTCGCGTCGACG 379948
Query 25783 TACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCC 25842
||||| || ||||||| || |||||||||||||||||| || || ||||| || | ||
Sbjct 379949 TACTCGGCCCCGAAATGCCGCCACTGGAACCCGTACACTGGGCCCAGGTCGCCCGCCTCG 380008
Query 25843 CTGTGCTCAAAGCCCCTC-TTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTT 25901
| ||| | |||||| | | || | | || | || || ||| |||||||||||||
Sbjct 380009 CGGTG-GCCCAGCCCCACGCTGTCGAGGTACTCGCGAGACCCGTTGCCGTCCCAGATCTT 380067
Query 25902 TACCCCCTTCTCGGAGAG 25919
|| |||| || |||||
Sbjct 380068 GACGCCCTGTTCTGAGAG 380085
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340133516754405
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |