Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq556 100 2e-16 >seq556 Length=684303 Score = 100 bits (110), Expect = 2e-16 Identities = 179/258 (69%), Gaps = 14/258 (5%) Strand=Plus/Plus Query 25669 GGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAA----GATC 25724 |||||||| |||| || |||||||| || ||| | ||||||| | ||| |||| Sbjct 379835 GGGTTCCACGCGCTCATGATGATGCGCCGGTCGTACGGGTTGTGCTTGAGCTTGTGGATC 379894 Query 25725 --CGCGGTGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTG 25782 | ||| |||||| || || ||| |||| |||||| || || ||| | Sbjct 379895 ACCTCGGC------CAGCTGGTCGACGCCCTGGCCCGTGTAGTCGGCTTTCGCGTCGACG 379948 Query 25783 TACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCC 25842 ||||| || ||||||| || |||||||||||||||||| || || ||||| || | || Sbjct 379949 TACTCGGCCCCGAAATGCCGCCACTGGAACCCGTACACTGGGCCCAGGTCGCCCGCCTCG 380008 Query 25843 CTGTGCTCAAAGCCCCTC-TTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTT 25901 | ||| | |||||| | | || | | || | || || ||| ||||||||||||| Sbjct 380009 CGGTG-GCCCAGCCCCACGCTGTCGAGGTACTCGCGAGACCCGTTGCCGTCCCAGATCTT 380067 Query 25902 TACCCCCTTCTCGGAGAG 25919 || |||| || ||||| Sbjct 380068 GACGCCCTGTTCTGAGAG 380085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340133516754405