Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq512 82.4 6e-11
>seq512
Length=287951
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/201 (70%), Gaps = 4/201 (2%)
Strand=Plus/Plus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
|||||||||||||||||| || | | || ||||||| |||||||| ||| | |
Sbjct 18446 CTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAA 18505
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TA 48652
|| | |||||||| || || | | ||||||||| || || ||||| |
Sbjct 18506 GATAAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 18565
Query 48653 GACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTC 48712
| || |||||||||| ||||| ||| | || ||||| || || ||||| || |||
Sbjct 18566 GTCG--ATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTC 18623
Query 48713 ACAAAAATCTGCATCGTGTCT 48733
|| || |||||||| ||| ||
Sbjct 18624 ACGAAGATCTGCATGGTGGCT 18644
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421246143010985
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |