Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq512 100 3e-16 seq1 93.3 4e-14 >seq512 Length=287951 Score = 100 bits (110), Expect = 3e-16 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 |||| ||| | |||||||||||| || | ||| || ||| | || ||| | ||||| Sbjct 18201 ACCAGGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGG--AGAGGGTTCGCCCATCCT 18258 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | ||||| ||||| ||||||| | | ||||| || || || || || || ||||| | Sbjct 18259 CGAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCT 18318 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || || | |||||| | ||| ||||| | | ||||| || | || ||||| | Sbjct 18319 GGATCTTGGACTTGACATTGTCGATGGTGTCTGAGGACTCGACCTCGAGGGTAATGGTCT 18378 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | ||||| ||||| || || ||||||||||| Sbjct 18379 TGCCAGTCAGAGTCTTGACGAAGATCTGCAT 18409 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 ||||| |||||||| | ||| || ||| | ||| | ||||| ||||| || ||| Sbjct 18441 GTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 18500 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 ||||||| | | ||||| || || || || || || ||||| | || || | |||| Sbjct 18501 GCAAAGATAAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 18560 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 ||| | ||| || || | | ||||| |||| |||||||| || || || || || Sbjct 18561 ACGTTGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCTGTGAGGGTC 18620 Query 94991 TTCACAAAGATCTGCATG 95008 ||||| |||||||||||| Sbjct 18621 TTCACGAAGATCTGCATG 18638 >seq1 Length=1124325 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| |||| ||||| || || ||||| || | ||| || ||| | ||| | Sbjct 67682 CGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCG 67623 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || ||| | ||||| | | ||||| ||||| ||||| ||||| ||| Sbjct 67622 TCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTG 67563 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || | |||||| | ||| ||||| | || || |||| ||||| Sbjct 67562 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATA 67503 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 || || || || || || ||||| |||||||||||| Sbjct 67502 GTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATG 67467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448285680414600