Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq512 100 3e-16
seq1 93.3 4e-14
>seq512
Length=287951
Score = 100 bits (110), Expect = 3e-16
Identities = 150/211 (71%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856
|||| ||| | |||||||||||| || | ||| || ||| | || ||| | |||||
Sbjct 18201 ACCAGGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGG--AGAGGGTTCGCCCATCCT 18258
Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916
| ||||| ||||| ||||||| | | ||||| || || || || || || ||||| |
Sbjct 18259 CGAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCT 18318
Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976
|| || | |||||| | ||| ||||| | | ||||| || | || ||||| |
Sbjct 18319 GGATCTTGGACTTGACATTGTCGATGGTGTCTGAGGACTCGACCTCGAGGGTAATGGTCT 18378
Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| ||||| ||||| || || |||||||||||
Sbjct 18379 TGCCAGTCAGAGTCTTGACGAAGATCTGCAT 18409
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870
||||| |||||||| | ||| || ||| | ||| | ||||| ||||| || |||
Sbjct 18441 GTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 18500
Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930
||||||| | | ||||| || || || || || || ||||| | || || | ||||
Sbjct 18501 GCAAAGATAAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 18560
Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990
||| | ||| || || | | ||||| |||| |||||||| || || || || ||
Sbjct 18561 ACGTTGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCTGTGAGGGTC 18620
Query 94991 TTCACAAAGATCTGCATG 95008
||||| ||||||||||||
Sbjct 18621 TTCACGAAGATCTGCATG 18638
>seq1
Length=1124325
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|||| |||| ||||| || || ||||| || | ||| || ||| | ||| |
Sbjct 67682 CGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCG 67623
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||| ||||| || ||| | ||||| | | ||||| ||||| ||||| ||||| |||
Sbjct 67622 TCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTG 67563
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || | |||||| | ||| ||||| | || || |||| |||||
Sbjct 67562 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATA 67503
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008
|| || || || || || ||||| ||||||||||||
Sbjct 67502 GTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATG 67467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448285680414600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |