Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq579 107 3e-19 >seq579 Length=262869 Score = 107 bits (118), Expect = 3e-19 Identities = 86/101 (85%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| |||||| || |||||||| || ||||||||||| || || Sbjct 225751 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCCAT 225809 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| || ||||||||||| ||||||||| |||||| Sbjct 225810 CCGACGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCTG 225850 Score = 82.4 bits (90), Expect = 1e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 16529 TCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATC 16588 |||| | || |||| || |||| || || | ||| ||||||| || ||| ||| Sbjct 225914 TCTGCAGTGATCTACGAGGAGACCCGCTCCGTCCTCAAGTCCTTCCTCGAGGGCGTCATC 225973 Query 16589 CATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATC 16648 | ||| ||| || ||| ||||||||||| || || ||||| ||||| || |||| | Sbjct 225974 CGTGACGCTGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACATCTCTGGACGTT 226033 Query 16649 GTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAATCTTCTAAT 16708 ||||| || |||| || || ||||| | | || ||||| || ||||| | ||| || Sbjct 226034 GTCTACGCCCTGAAGCGACAGGGCCGCACTCTGTACGGTTTCGGTGGTTAAACATCTCAT 226093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074299407605