Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq579 107 3e-19
>seq579
Length=262869
Score = 107 bits (118), Expect = 3e-19
Identities = 86/101 (85%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || |||||||| || ||||||||||| || ||
Sbjct 225751 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCCAT 225809
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| || ||||||||||| ||||||||| ||||||
Sbjct 225810 CCGACGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCTG 225850
Score = 82.4 bits (90), Expect = 1e-11
Identities = 126/180 (70%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 16529 TCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATC 16588
|||| | || |||| || |||| || || | ||| ||||||| || ||| |||
Sbjct 225914 TCTGCAGTGATCTACGAGGAGACCCGCTCCGTCCTCAAGTCCTTCCTCGAGGGCGTCATC 225973
Query 16589 CATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATC 16648
| ||| ||| || ||| ||||||||||| || || ||||| ||||| || |||| |
Sbjct 225974 CGTGACGCTGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACATCTCTGGACGTT 226033
Query 16649 GTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAATCTTCTAAT 16708
||||| || |||| || || ||||| | | || ||||| || ||||| | ||| ||
Sbjct 226034 GTCTACGCCCTGAAGCGACAGGGCCGCACTCTGTACGGTTTCGGTGGTTAAACATCTCAT 226093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074299407605
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |