Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq279 109 5e-19
>seq279
Length=349471
Score = 109 bits (120), Expect = 5e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701
|| ||| || || ||||| || ||||| || || |||||||| | ||||| ||||| |
Sbjct 262619 CTGGTAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGAGAGAGATGTTCTC 262678
Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761
||| || ||||| || || | | ||| || ||| |||| ||||| ||| || ||
Sbjct 262679 CATGAAGTCGAAGGGGTTCGACGACTTGTAAACCTTCTCGTTGCCCAGAGCGACCAGGAG 262738
Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAG 119820
|| || || |||||||||||||| | |||| | ||| || |||||||| | | |
Sbjct 262739 ACGGTCGGCAACAAACTCGATGTACTGCTTCATGAGGTTG-GAGTTCATGCCGAGGAGGG 262797
Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869
|| || | ||| | ||| ||||| ||||| |||||| |||| || ||
Sbjct 262798 CGCATGGCAGAGCCTCGGTCAAGAACTCCTTCTCAATGGCGACAGCCTC 262846
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478656506469200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |