Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq334 343 4e-89
>seq334
Length=742376
Score = 343 bits (380), Expect = 4e-89
Identities = 1168/1795 (65%), Gaps = 50/1795 (3%)
Strand=Plus/Minus
Query 363390 TTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTA-TCAATGGTGATATTGTTG 363448
|||||| | ||||| ||||| || ||||| ||| || ||||| | |||| |
Sbjct 396112 TTTCGGCTTCAAGACCCTGGAGCGTTCATACCTC-CTCAAGCTCGATGGTAAAGTTGTCG 396054
Query 363449 AACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATG 363508
| || || ||||| ||| | |||||||| ||| | |||||| | ||||| ||
Sbjct 396053 AGCGGCCACAGCACATGATCATGCGTGTCGCTGTCGGTATCTGGGGAGACGATGTCGAAA 395994
Query 363509 CCGCGATTGAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCCACGCCA 363564
| ||||| ||||| || || || || | || | ||||| || ||| | ||
Sbjct 395993 GGGTCATTGAGACATACAACCTGATGTCAAA---CAAGT-TCTTCACACATGCCTCCCCC 395938
Query 363565 ACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATG 363624
||| ||| ||||||||| |||| | || ||| |||| || ||||| || | | |||
Sbjct 395937 ACATTGTTCAATGCTGGCACTCCCCAGCCCCAGCTGTCATCATGCTTCCTCGTCGACATG 395878
Query 363625 AAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAG 363684
||||| || ||| ||||| || | |||||| || |||| ||||||| | || ||||||
Sbjct 395877 AAGGAGGACAGCATTGAGGGCATTTATGACACCCTAAAGACTTGTGCTATGATCTCCAAG 395818
Query 363685 AATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTC 363742
| || || ||||||||| | | || | ||| | ||||| || | | ||||| |
Sbjct 395817 ATGGCGGGTGGAATTGGTCTGAACG-TGCACCGCATCCGTGCCACCGG-CTCATACAT-C 395761
Query 363743 GC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACT 363801
|| ||||| || ||| ||||| | || ||||| || || || |||| ||
Sbjct 395760 GCTGGCACCAACGGTACCTCTAATGGCATCACCCCAATGCTGCGGGTCTTCAACAACACC 395701
Query 363802 GCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAG 363861
|| | ||||||||||||||||| ||||| || || || ||||| || || |||
Sbjct 395700 GCCCGATACGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTCGCTATCTACCTTGAG 395641
Query 363862 CCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-CACGGGAAAAGAGGA 363920
|| || |||||| | || ||||||||||| || || || || ||||| || |||||
Sbjct 395640 CCATGGCACGCCGATGTCTTCGAGTTTCTTGACCTGCGCAAGAATCACGGTAAG-GAGGA 395582
Query 363921 ATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGT 363980
| || || |||||||| ||| ||| || ||| || | || | ||| |||||||| ||
Sbjct 395581 GATCCGAGCCCGTGATCTTTTCCTTGCCCTCTGGATTCCCGATCTTTTCATGAAGCGGGT 395522
Query 363981 GGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGAT 364038
||| | | | | | ||| | || | ||||| |||| ||||| || || ||||
Sbjct 395521 CGAG--AAGAACGGTGACTGGACCCTGATGTGCCCTAACGAGTGTCCTGGCCTCGCCGAC 395464
Query 364039 GTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGT 364098
| ||||| || | || ||||| ||||| |||| || |||||| | |||
Sbjct 395463 TGCTACGGTGAGGAGTTTGAGGCTCTCTACGAGCAGTACGAGAAGGAGGGTCGTGGTCGC 395404
Query 364099 AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158
||||| || || ||||||||||||| |||||| | || | |||| |||||| ||
Sbjct 395403 AAGACCATGAAGGCCCAGAAGCTATGGTATGCCATTCTCGAGGCCCAGACTGAGACTGGC 395344
Query 364159 ACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGT 364218
| |||| ||| ||||||| || |||||| ||| ||||||| || |||| |||
Sbjct 395343 AACCCCTTCATGCTGTACAAGGACCACGCCAACCGGAAGAGCAACCAGAAGAACCTGGGT 395284
Query 364219 ACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGAC 364277
|| | || | || ||| || || || ||||| ||||| ||| | || || || |||
Sbjct 395283 ACCA-TCCGAAGCTCCAATCTTTGCACTGAGATCATTGAGTACTCTGCCCCAGATGAGGT 395225
Query 364278 TGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT----------AAAAGATG 364327
|| || || ||| | || || || || || || || | ||| || | ||
Sbjct 395224 CGCGGTGTGCAACTTGGCCTCCATTGCTCTGCCCGCATATGTTGACTACGACAACAACTG 395165
Query 364328 GTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCGA 364385
||| || |||||| | | || || ||| | || | | | |||| | |
Sbjct 395164 CTAC----AACTTCCAGCAGTTGCACGAGGTTACCCAGGTCGTCGTCC--GCAACTTGAA 395111
Query 364386 CAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCA 364445
|||| | || || || | || || | || ||| | || ||||| ||
Sbjct 395110 CAAGATCATTGATGTCAACCACTACCCGGTCAAGGAGGCCTACAACAGCAACATGCGGCA 395051
Query 364446 TCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGC 364505
|| || |||||| | ||||| ||||| || || |||| || || || || |
Sbjct 395050 CCGACCTATTGGTGTCGGTGTTCAGGGTCTTGCCGACGCATTCTTGGCACTGCGCATACC 394991
Query 364506 ATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGC 364565
|| || || || || || |||| || || ||| ||||||| || || || || ||
Sbjct 394990 TTTCGACTCCCCAGAGGCCCGTGAGCTGAACAAGCAGATCTTCGAGACCATCTACCACGC 394931
Query 364566 CGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGG 364625
|| | ||||| || |||| | || || |||| ||| || || |||||
Sbjct 394930 TGCCCTCACTGCATCAAGTGACATTGCCAAGGTGGAGGGCCCCTACAAGACATACGAGGG 394871
Query 364626 GTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCG 364685
||| | ||||| || | | ||||| || | |||||||||| ||| || | ||
Sbjct 394870 CAGCCCCGTCTCGCAAGGCATCCTGCAGTTCGACATGTGGAATGTCAAGCCCTCCGACCT 394811
Query 364686 ATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGT 364745
||| |||||||| | || || | ||| || |||| ||||||| || ||
Sbjct 394810 CTGGGACTGGGATGCACTGAAGGAGAAGATCAAGGAGACTGGTGTTCGCAAC-AGCTTGT 394752
Query 364746 TAC-AGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCG 364804
| | || || |||||||| ||||| || | || ||||| || ||||| |||||||| |
Sbjct 394751 TGCTGGCACCAATGCCCACTGCTTCGACGTCGCAAATCCTGGGCAACAATGAGTGCTTTG 394692
Query 364805 AACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTA 364864
| || | || ||| | || || || || || | || || || | ||| || |
Sbjct 394691 AGCCATACACCTCCAACATCTACCAGCGACGTGTGCTCGCTGGCGAGTTCCAGGTCGTCA 394632
Query 364865 ATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACT 364924
| | || ||| |||||| | || | ||| ||||| ||| ||||||||||
Sbjct 394631 ACCCTTGGCTCCTCAGGGATCTGACAGAGCTCGGCTTGTGGTCTGAGGCCATGAAGAACC 394572
Query 364925 ATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGC 364984
||||||||||| ||||||| | ||||||||||| | | || | ||| | |||
Sbjct 394571 GTATCATCGCCGAGGATGGTTCCATTCAGAACATTCCTAGCATCCCGGCTGATATCAAGG 394512
Query 364985 CTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTG---ATATGGCGGCCG 365041
| | ||||| ||||| ||||| || || | | || ||||| | ||||| || |
Sbjct 394511 CCCTCTACAAGACCGTCTGGGAGATCTCTCAGAGGAC---CATTGTGCAGATGGCTGCTG 394455
Query 365042 ATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCT 365101
| || ||||| || || ||| ||||| | ||| | ||||| ||||| |
Sbjct 394454 ACCGTGGTGCCTTCATTGATCAATCTCAGTCTCTAAACATCCACATGAGGGAGCCATCAA 394395
Query 365102 CCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
| |||| | || |||||| ||| ||| ||||| |||||| ||||| ||
Sbjct 394394 TGGGCAAGATCACCAGCATGCACTTCGCCGGCTGGAAGCTCGGTCTCAAGACTGG 394340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303337151270270
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |