Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq334 343 4e-89 >seq334 Length=742376 Score = 343 bits (380), Expect = 4e-89 Identities = 1168/1795 (65%), Gaps = 50/1795 (3%) Strand=Plus/Minus Query 363390 TTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTA-TCAATGGTGATATTGTTG 363448 |||||| | ||||| ||||| || ||||| ||| || ||||| | |||| | Sbjct 396112 TTTCGGCTTCAAGACCCTGGAGCGTTCATACCTC-CTCAAGCTCGATGGTAAAGTTGTCG 396054 Query 363449 AACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATG 363508 | || || ||||| ||| | |||||||| ||| | |||||| | ||||| || Sbjct 396053 AGCGGCCACAGCACATGATCATGCGTGTCGCTGTCGGTATCTGGGGAGACGATGTCGAAA 395994 Query 363509 CCGCGATTGAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCCACGCCA 363564 | ||||| ||||| || || || || | || | ||||| || ||| | || Sbjct 395993 GGGTCATTGAGACATACAACCTGATGTCAAA---CAAGT-TCTTCACACATGCCTCCCCC 395938 Query 363565 ACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATG 363624 ||| ||| ||||||||| |||| | || ||| |||| || ||||| || | | ||| Sbjct 395937 ACATTGTTCAATGCTGGCACTCCCCAGCCCCAGCTGTCATCATGCTTCCTCGTCGACATG 395878 Query 363625 AAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAG 363684 ||||| || ||| ||||| || | |||||| || |||| ||||||| | || |||||| Sbjct 395877 AAGGAGGACAGCATTGAGGGCATTTATGACACCCTAAAGACTTGTGCTATGATCTCCAAG 395818 Query 363685 AATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTC 363742 | || || ||||||||| | | || | ||| | ||||| || | | ||||| | Sbjct 395817 ATGGCGGGTGGAATTGGTCTGAACG-TGCACCGCATCCGTGCCACCGG-CTCATACAT-C 395761 Query 363743 GC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACT 363801 || ||||| || ||| ||||| | || ||||| || || || |||| || Sbjct 395760 GCTGGCACCAACGGTACCTCTAATGGCATCACCCCAATGCTGCGGGTCTTCAACAACACC 395701 Query 363802 GCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAG 363861 || | ||||||||||||||||| ||||| || || || ||||| || || ||| Sbjct 395700 GCCCGATACGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTCGCTATCTACCTTGAG 395641 Query 363862 CCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-CACGGGAAAAGAGGA 363920 || || |||||| | || ||||||||||| || || || || ||||| || ||||| Sbjct 395640 CCATGGCACGCCGATGTCTTCGAGTTTCTTGACCTGCGCAAGAATCACGGTAAG-GAGGA 395582 Query 363921 ATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGT 363980 | || || |||||||| ||| ||| || ||| || | || | ||| |||||||| || Sbjct 395581 GATCCGAGCCCGTGATCTTTTCCTTGCCCTCTGGATTCCCGATCTTTTCATGAAGCGGGT 395522 Query 363981 GGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGAT 364038 ||| | | | | | ||| | || | ||||| |||| ||||| || || |||| Sbjct 395521 CGAG--AAGAACGGTGACTGGACCCTGATGTGCCCTAACGAGTGTCCTGGCCTCGCCGAC 395464 Query 364039 GTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGT 364098 | ||||| || | || ||||| ||||| |||| || |||||| | ||| Sbjct 395463 TGCTACGGTGAGGAGTTTGAGGCTCTCTACGAGCAGTACGAGAAGGAGGGTCGTGGTCGC 395404 Query 364099 AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158 ||||| || || ||||||||||||| |||||| | || | |||| |||||| || Sbjct 395403 AAGACCATGAAGGCCCAGAAGCTATGGTATGCCATTCTCGAGGCCCAGACTGAGACTGGC 395344 Query 364159 ACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGT 364218 | |||| ||| ||||||| || |||||| ||| ||||||| || |||| ||| Sbjct 395343 AACCCCTTCATGCTGTACAAGGACCACGCCAACCGGAAGAGCAACCAGAAGAACCTGGGT 395284 Query 364219 ACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGAC 364277 || | || | || ||| || || || ||||| ||||| ||| | || || || ||| Sbjct 395283 ACCA-TCCGAAGCTCCAATCTTTGCACTGAGATCATTGAGTACTCTGCCCCAGATGAGGT 395225 Query 364278 TGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT----------AAAAGATG 364327 || || || ||| | || || || || || || || | ||| || | || Sbjct 395224 CGCGGTGTGCAACTTGGCCTCCATTGCTCTGCCCGCATATGTTGACTACGACAACAACTG 395165 Query 364328 GTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCGA 364385 ||| || |||||| | | || || ||| | || | | | |||| | | Sbjct 395164 CTAC----AACTTCCAGCAGTTGCACGAGGTTACCCAGGTCGTCGTCC--GCAACTTGAA 395111 Query 364386 CAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCA 364445 |||| | || || || | || || | || ||| | || ||||| || Sbjct 395110 CAAGATCATTGATGTCAACCACTACCCGGTCAAGGAGGCCTACAACAGCAACATGCGGCA 395051 Query 364446 TCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGC 364505 || || |||||| | ||||| ||||| || || |||| || || || || | Sbjct 395050 CCGACCTATTGGTGTCGGTGTTCAGGGTCTTGCCGACGCATTCTTGGCACTGCGCATACC 394991 Query 364506 ATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGC 364565 || || || || || || |||| || || ||| ||||||| || || || || || Sbjct 394990 TTTCGACTCCCCAGAGGCCCGTGAGCTGAACAAGCAGATCTTCGAGACCATCTACCACGC 394931 Query 364566 CGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGG 364625 || | ||||| || |||| | || || |||| ||| || || ||||| Sbjct 394930 TGCCCTCACTGCATCAAGTGACATTGCCAAGGTGGAGGGCCCCTACAAGACATACGAGGG 394871 Query 364626 GTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCG 364685 ||| | ||||| || | | ||||| || | |||||||||| ||| || | || Sbjct 394870 CAGCCCCGTCTCGCAAGGCATCCTGCAGTTCGACATGTGGAATGTCAAGCCCTCCGACCT 394811 Query 364686 ATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGT 364745 ||| |||||||| | || || | ||| || |||| ||||||| || || Sbjct 394810 CTGGGACTGGGATGCACTGAAGGAGAAGATCAAGGAGACTGGTGTTCGCAAC-AGCTTGT 394752 Query 364746 TAC-AGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCG 364804 | | || || |||||||| ||||| || | || ||||| || ||||| |||||||| | Sbjct 394751 TGCTGGCACCAATGCCCACTGCTTCGACGTCGCAAATCCTGGGCAACAATGAGTGCTTTG 394692 Query 364805 AACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTA 364864 | || | || ||| | || || || || || | || || || | ||| || | Sbjct 394691 AGCCATACACCTCCAACATCTACCAGCGACGTGTGCTCGCTGGCGAGTTCCAGGTCGTCA 394632 Query 364865 ATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACT 364924 | | || ||| |||||| | || | ||| ||||| ||| |||||||||| Sbjct 394631 ACCCTTGGCTCCTCAGGGATCTGACAGAGCTCGGCTTGTGGTCTGAGGCCATGAAGAACC 394572 Query 364925 ATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGC 364984 ||||||||||| ||||||| | ||||||||||| | | || | ||| | ||| Sbjct 394571 GTATCATCGCCGAGGATGGTTCCATTCAGAACATTCCTAGCATCCCGGCTGATATCAAGG 394512 Query 364985 CTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTG---ATATGGCGGCCG 365041 | | ||||| ||||| ||||| || || | | || ||||| | ||||| || | Sbjct 394511 CCCTCTACAAGACCGTCTGGGAGATCTCTCAGAGGAC---CATTGTGCAGATGGCTGCTG 394455 Query 365042 ATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCT 365101 | || ||||| || || ||| ||||| | ||| | ||||| ||||| | Sbjct 394454 ACCGTGGTGCCTTCATTGATCAATCTCAGTCTCTAAACATCCACATGAGGGAGCCATCAA 394395 Query 365102 CCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | |||| | || |||||| ||| ||| ||||| |||||| ||||| || Sbjct 394394 TGGGCAAGATCACCAGCATGCACTTCGCCGGCTGGAAGCTCGGTCTCAAGACTGG 394340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303337151270270