Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq334 154 1e-32 seq279 150 2e-31 seq512 141 9e-29 seq1 134 1e-26 seq24 87.8 2e-12 >seq334 Length=742376 Score = 154 bits (170), Expect = 1e-32 Identities = 959/1513 (63%), Gaps = 49/1513 (3%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| |||||||| || | |||||| ||| || | ||| || ||| | || Sbjct 394631 TTGACGACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGC 394690 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| |||| || |||||||||||||| | |||| || |||||||| |||| | Sbjct 394691 TCAAAGCACTCATTGTTGCCCAGGATTTGCGACGTCGAAGCAGTGGGCATTGGTGCCAGC 394750 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 || || ||||| | || || |||||| | ||||| || | | |||| ||||| Sbjct 394751 AACAAGCTGTTGCGAACACCAGTCTCCTTGATCTTCTCCTTCAGTGCATCCCAGTCCCAG 394810 Query 145238 AG--CGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGC 145295 || || || ||| | || | |||||||||| |||||| ||||| | | |||||| Sbjct 394811 AGGTCGGAG--GGCTTGACATTCCACATGTCGAACTGCAGGATGCCTTGCGAGACGGGGC 394868 Query 145296 TGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCA--G 145353 |||| | | | |||| |||| ||||| | || ||| | | || | Sbjct 394869 TGCCCTCGTATGTCTTGTAGGGGCCCTCCACCTTGGCAATGTC---ACTTG-ATGCAGTG 394924 Query 145354 AGCGC--CGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTC 145411 || || || || || |||||| || ||| |||| ||| || || | Sbjct 394925 AGGGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGGGCCTCTGGGGAG 394984 Query 145412 TCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATG 145471 ||| | || |||||||| | || || ||||| || ||||| | || || || || Sbjct 394985 TCGAAAGGTATGCGCAGTGCCAAGAATGCGTCGGCAAGACCCTGAACACCGACACCAATA 395044 Query 145472 GGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATA 145531 || || || ||||||||| | ||| || || || || | || || || Sbjct 395045 GGTCGGTGCCGCATGTTGCTGTTGTAGGCCTCCTTGACCGGGTAGTGGTTGACATCAATG 395104 Query 145532 ATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAAC 145591 || || |||||||| || || || |||| |||| | |||||| | |||| | Sbjct 395105 ATCTTGTTCAAGTTGCGGACGACGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAG 395164 Query 145592 CGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCC 145651 | | ||| | | ||| | | || || || ||||| || || || || Sbjct 395165 CAGTTGTTGTCGTAGTCAACATATGCGGGCAGAGCAATGGAGGCCAAGTTGCACACCGCG 395224 Query 145652 GTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTT 145711 ||| || | | | ||| | | |||||| | ||| | |||| | | |||||| Sbjct 395225 ACCTCATCTGGGGCAGAGTACTCAATGATCTCAGTGCAAAGATTGGAGCTTCGGATGGTA 395284 Query 145712 CCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCG 145771 ||||| || | ||| || || |||| |||| ||||||||| |||||| | || | Sbjct 395285 CCCAGGTTCTTCTGGTTGCTCTTCCGGTTGGCGTGGTCCTTGTACAGCATGAAGGGGTTG 395344 Query 145772 CCAGTCTCCACCTGCGTCTCCACGAT--AAAACGGTGCAAGTCCTGCGCACGCACCTGCT 145829 |||||||| ||| | ||| | || | || | | | ||| || || || | Sbjct 395345 CCAGTCTCAGTCTGGGCCTCGAGAATGGCATACCAT--AGCTTCTGGGCCTTCA--TGGT 395400 Query 145830 GCTGGTA--GCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTA 145887 || | || ||||| | ||||| | | |||||| |||||||| | |||||| Sbjct 395401 CTTGCGACCACGACCCTCCTTCTCGTACTGCTCGTAGAGAGCCTCAAACTCCTCACCGTA 395460 Query 145888 GCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTT 145947 ||| |||| ||||| ||||||| ||| || |||||||| | ||| | ||||| | Sbjct 395461 GCAGTCGGCGAGGCCAGGACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTC 395520 Query 145948 GACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCA 146007 ||| |||| ||| || | ||| || | ||| || || | | || || ||| | Sbjct 395521 GACCCGCTTCATGAAAAGATCGGGAATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGAT 395580 Query 146008 ATCCTCAGCACCCATGTTTC--GCTTCAAATTAAGCACACT-ATAGATGTCCGCGTGCCA 146064 ||||| | || || ||| || || | ||| | ||| ||| || |||||||| Sbjct 395581 CTCCTCCTTA-CCGTGATTCTTGC-GCAGGTCAAG-AAACTCGAAGACATCGGCGTGCCA 395637 Query 146065 CGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACG 146121 || |||| |||| |||| ||| || || |||||||||||||| |||| || Sbjct 395638 TGGCTCAAGGTAGATAGCGAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTATCG 395697 Query 146122 TACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGT--- 146178 | ||||||| ||||| |||| ||| || || ||| | | ||||| || Sbjct 395698 GGCGGTGTTGTTGAAGACCCGCAGCATTGGGGTGATGCCATTAGAGGTACCGTTGGTGCC 395757 Query 146179 AGAG-TTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACC-GCCG 146236 || | | ||| | |||| || || | || || || |||| || | || ||| Sbjct 395758 AGCGATGTAT----GAGCCGGTGGCACGGATGCGGTGCACGTTCAGACCAATTCCACCCG 395813 Query 146237 CCGTACTTGGATATAGCGGCGC-AGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC 146295 || | |||||| || || | |||| || || || || ||||| |||||||| || Sbjct 395814 CCAT-CTTGGAGATCATAGCACAAGTC-TTTAGGGTGTCATAAATGCCCTCAATGCTGTC 395871 Query 146296 --GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAG 146353 |||| ||| ||| || ||||| || ||| ||| | | || || || || | Sbjct 395872 CTCCTTC--ATGTCGACGAGGAAGCATGATGACAGCTGGGGCTGGGGAGTGCCAGCATTG 395929 Query 146354 AACAACGTCGGGCTCGCGTGCGTAAACA--TTTTTCGGCTCATCATCCGATACGTTTCGA 146411 ||||| || ||| || || || || | || || | ||||| || || || | Sbjct 395930 AACAATGTGGGGGAGGCATGTGTGAAGAACTTGTTTG--ACATCAGGTTGTATGTCTCAA 395987 Query 146412 TAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGG 146471 | | || | ||||| || || || | |||||| ||||||| |||||| || | Sbjct 395988 TGACCCTTTCGACATCGTCTCCCCAGATACCGACAGCGACACGCATGATCATGTGCTGTG 396047 Query 146472 GCCGCTCCGCCACTTGATTGTCAATCTTTAACAAATAGCCGTTCTCCAGGGTTTTGTATC 146531 ||||||| | |||| | || | ||| | | || ||||||||| ||| | | Sbjct 396048 GCCGCTCGACAACTTTACCATCGAGCTTGAGGAGGTATGAACGCTCCAGGGTCTTGAAGC 396107 Query 146532 CGAAAAATTTGTA 146544 ||||| ||| ||| Sbjct 396108 CGAAATATTGGTA 396120 >seq279 Length=349471 Score = 150 bits (166), Expect = 2e-31 Identities = 350/518 (68%), Gaps = 21/518 (4%) Strand=Plus/Minus Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACT 46146 |||||| | |||||||| |||||||||| | ||||||||| ||| ||||||| | Sbjct 263128 CCGTGCATCCGCAAGAAGGCCGACTGGGCTCTCAAGTGGATC-----CAGGACCGCGAGT 263074 Query 46147 -----TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCA 46201 | |||| |||| |||| ||||| || || |||||| |||| || |||| Sbjct 263073 CCACCTACGCCCAGCGACTGGTTGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGCG 263014 Query 46202 GTTTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCA 46261 || ||| | || || | |||| | ||| ||||||| |||||||| || || Sbjct 263013 CATTCGCCTCTATTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCTCCA 262954 Query 46262 ACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACA 46321 ||||||| || || || || ||||| ||||| || ||||| || |||||| || | | Sbjct 262953 ACGAGCTCATTTCTCGTGATGAGGGTCTGCACACCGACTTCGCCTGTCTC--CTGTT-CT 262897 Query 46322 CTCGCGTGCACGACAAGCTTGCGCCCGA-CACCGTGCTGAG--CATGTTCAAGGAGGCGG 46378 ||| | || | || | | | | | | || |||| || ||| ||| ||||| | Sbjct 262896 CTCACCTG-AGGA--ACCGTCCAAGCAAGCAGCGTGTCCAGGACATCATCACCGAGGCTG 262840 Query 46379 TGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACG 46438 | ||||||||||||||||| || || | || ||||| ||||| || ||||||||| Sbjct 262839 TCGCCATTGAGAAGGAGTTCTTGACCGAGGCTCTGCCATGCGCCCTCCTCGGCATGAACT 262780 Query 46439 CACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACC 46498 | | ||| | |||||||||||||| || ||||| || || || || | Sbjct 262779 CCAACCTCATGAAGCAGTACATCGAGTTTGTTGCCGACCGTCTCCTGGTCGCTCTGGGCA 262720 Query 46499 AGCCGAAGCATTTTCACG-CGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAG 46557 | |||| ||| || | || || || || || || ||| | |||||||| || | Sbjct 262719 ACGAGAAG-GTTTACAAGTCGTCGAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGT 262661 Query 46558 GGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 ||||| || || || || || ||||| ||||| || || Sbjct 262660 GGCAAGACCAACTTCTTTGAGAAGCGTGTCGGTGACTA 262623 >seq512 Length=287951 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | ||| | ||| |||||||||||||||||||| ||| Sbjct 18411 CCGCCACGAAGACGGAGGACGAGATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAG 18470 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| || |||| | ||||||||||| || ||| Sbjct 18471 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCAGGGGGG 18530 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | ||||||| |||||||| Sbjct 18531 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCGGAGGACTCGACC 18590 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | ||| || || || || || || ||||| ||||||||| Sbjct 18591 TCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATG 18638 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || || ||||| || |||||||| ||| | ||| ||| ||||| |||||||| || Sbjct 18213 GTAGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGCCCATCCTCGAGCTGCTTTCCA 18272 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 || |||| | |||||||||||| || ||||| || || ||||| ||| || |||| Sbjct 18273 GCAAAGATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 18332 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || || | |||||||| |||| ||||| ||| || || || ||||| Sbjct 18333 ACATTGTCGATGGTGTCTGAGGACTCGACCTCGAGGGTAATGGTCTTGCCAGTCAGAGTC 18392 Query 131218 TTTACGAAAATCTGCAT 131234 || ||||| |||||||| Sbjct 18393 TTGACGAAGATCTGCAT 18409 >seq1 Length=1124325 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| ||||| || | || | ||| |||||||| || |||||||| ||| Sbjct 67694 CCACCGCGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 67635 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| | |||||||||||| || || Sbjct 67634 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGA 67575 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 67574 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 67515 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 || | ||| | || || || || || || || ||||| |||||||||| Sbjct 67514 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATGA 67466 >seq24 Length=629884 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| || |||||| ||||| ||||||||||| ||| ||| Sbjct 219420 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 219361 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | || ||||||||||| || || || || || ||||| ||| || ||||| | | Sbjct 219360 TCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 219301 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||| | || | ||| | || || || || || || || |||| Sbjct 219300 CGATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGA 219241 Query 131225 A 131225 | Sbjct 219240 A 219240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472006988342400