Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq334 154 1e-32
seq279 150 2e-31
seq512 141 9e-29
seq1 134 1e-26
seq24 87.8 2e-12
>seq334
Length=742376
Score = 154 bits (170), Expect = 1e-32
Identities = 959/1513 (63%), Gaps = 49/1513 (3%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||||||||| |||||||| || | |||||| ||| || | ||| || ||| | ||
Sbjct 394631 TTGACGACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGC 394690
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
||||| |||| || |||||||||||||| | |||| || |||||||| |||| |
Sbjct 394691 TCAAAGCACTCATTGTTGCCCAGGATTTGCGACGTCGAAGCAGTGGGCATTGGTGCCAGC 394750
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
|| || ||||| | || || |||||| | ||||| || | | |||| |||||
Sbjct 394751 AACAAGCTGTTGCGAACACCAGTCTCCTTGATCTTCTCCTTCAGTGCATCCCAGTCCCAG 394810
Query 145238 AG--CGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGC 145295
|| || || ||| | || | |||||||||| |||||| ||||| | | ||||||
Sbjct 394811 AGGTCGGAG--GGCTTGACATTCCACATGTCGAACTGCAGGATGCCTTGCGAGACGGGGC 394868
Query 145296 TGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCA--G 145353
|||| | | | |||| |||| ||||| | || ||| | | || |
Sbjct 394869 TGCCCTCGTATGTCTTGTAGGGGCCCTCCACCTTGGCAATGTC---ACTTG-ATGCAGTG 394924
Query 145354 AGCGC--CGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTC 145411
|| || || || || |||||| || ||| |||| ||| || || |
Sbjct 394925 AGGGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGGGCCTCTGGGGAG 394984
Query 145412 TCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATG 145471
||| | || |||||||| | || || ||||| || ||||| | || || || ||
Sbjct 394985 TCGAAAGGTATGCGCAGTGCCAAGAATGCGTCGGCAAGACCCTGAACACCGACACCAATA 395044
Query 145472 GGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATA 145531
|| || || ||||||||| | ||| || || || || | || || ||
Sbjct 395045 GGTCGGTGCCGCATGTTGCTGTTGTAGGCCTCCTTGACCGGGTAGTGGTTGACATCAATG 395104
Query 145532 ATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAAC 145591
|| || |||||||| || || || |||| |||| | |||||| | |||| |
Sbjct 395105 ATCTTGTTCAAGTTGCGGACGACGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAG 395164
Query 145592 CGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCC 145651
| | ||| | | ||| | | || || || ||||| || || || ||
Sbjct 395165 CAGTTGTTGTCGTAGTCAACATATGCGGGCAGAGCAATGGAGGCCAAGTTGCACACCGCG 395224
Query 145652 GTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTT 145711
||| || | | | ||| | | |||||| | ||| | |||| | | ||||||
Sbjct 395225 ACCTCATCTGGGGCAGAGTACTCAATGATCTCAGTGCAAAGATTGGAGCTTCGGATGGTA 395284
Query 145712 CCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCG 145771
||||| || | ||| || || |||| |||| ||||||||| |||||| | || |
Sbjct 395285 CCCAGGTTCTTCTGGTTGCTCTTCCGGTTGGCGTGGTCCTTGTACAGCATGAAGGGGTTG 395344
Query 145772 CCAGTCTCCACCTGCGTCTCCACGAT--AAAACGGTGCAAGTCCTGCGCACGCACCTGCT 145829
|||||||| ||| | ||| | || | || | | | ||| || || || |
Sbjct 395345 CCAGTCTCAGTCTGGGCCTCGAGAATGGCATACCAT--AGCTTCTGGGCCTTCA--TGGT 395400
Query 145830 GCTGGTA--GCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTA 145887
|| | || ||||| | ||||| | | |||||| |||||||| | ||||||
Sbjct 395401 CTTGCGACCACGACCCTCCTTCTCGTACTGCTCGTAGAGAGCCTCAAACTCCTCACCGTA 395460
Query 145888 GCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTT 145947
||| |||| ||||| ||||||| ||| || |||||||| | ||| | ||||| |
Sbjct 395461 GCAGTCGGCGAGGCCAGGACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTC 395520
Query 145948 GACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCA 146007
||| |||| ||| || | ||| || | ||| || || | | || || ||| |
Sbjct 395521 GACCCGCTTCATGAAAAGATCGGGAATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGAT 395580
Query 146008 ATCCTCAGCACCCATGTTTC--GCTTCAAATTAAGCACACT-ATAGATGTCCGCGTGCCA 146064
||||| | || || ||| || || | ||| | ||| ||| || ||||||||
Sbjct 395581 CTCCTCCTTA-CCGTGATTCTTGC-GCAGGTCAAG-AAACTCGAAGACATCGGCGTGCCA 395637
Query 146065 CGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACG 146121
|| |||| |||| |||| ||| || || |||||||||||||| |||| ||
Sbjct 395638 TGGCTCAAGGTAGATAGCGAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTATCG 395697
Query 146122 TACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGT--- 146178
| ||||||| ||||| |||| ||| || || ||| | | ||||| ||
Sbjct 395698 GGCGGTGTTGTTGAAGACCCGCAGCATTGGGGTGATGCCATTAGAGGTACCGTTGGTGCC 395757
Query 146179 AGAG-TTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACC-GCCG 146236
|| | | ||| | |||| || || | || || || |||| || | || |||
Sbjct 395758 AGCGATGTAT----GAGCCGGTGGCACGGATGCGGTGCACGTTCAGACCAATTCCACCCG 395813
Query 146237 CCGTACTTGGATATAGCGGCGC-AGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC 146295
|| | |||||| || || | |||| || || || || ||||| |||||||| ||
Sbjct 395814 CCAT-CTTGGAGATCATAGCACAAGTC-TTTAGGGTGTCATAAATGCCCTCAATGCTGTC 395871
Query 146296 --GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAG 146353
|||| ||| ||| || ||||| || ||| ||| | | || || || || |
Sbjct 395872 CTCCTTC--ATGTCGACGAGGAAGCATGATGACAGCTGGGGCTGGGGAGTGCCAGCATTG 395929
Query 146354 AACAACGTCGGGCTCGCGTGCGTAAACA--TTTTTCGGCTCATCATCCGATACGTTTCGA 146411
||||| || ||| || || || || | || || | ||||| || || || |
Sbjct 395930 AACAATGTGGGGGAGGCATGTGTGAAGAACTTGTTTG--ACATCAGGTTGTATGTCTCAA 395987
Query 146412 TAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGG 146471
| | || | ||||| || || || | |||||| ||||||| |||||| || |
Sbjct 395988 TGACCCTTTCGACATCGTCTCCCCAGATACCGACAGCGACACGCATGATCATGTGCTGTG 396047
Query 146472 GCCGCTCCGCCACTTGATTGTCAATCTTTAACAAATAGCCGTTCTCCAGGGTTTTGTATC 146531
||||||| | |||| | || | ||| | | || ||||||||| ||| | |
Sbjct 396048 GCCGCTCGACAACTTTACCATCGAGCTTGAGGAGGTATGAACGCTCCAGGGTCTTGAAGC 396107
Query 146532 CGAAAAATTTGTA 146544
||||| ||| |||
Sbjct 396108 CGAAATATTGGTA 396120
>seq279
Length=349471
Score = 150 bits (166), Expect = 2e-31
Identities = 350/518 (68%), Gaps = 21/518 (4%)
Strand=Plus/Minus
Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACT 46146
|||||| | |||||||| |||||||||| | ||||||||| ||| ||||||| |
Sbjct 263128 CCGTGCATCCGCAAGAAGGCCGACTGGGCTCTCAAGTGGATC-----CAGGACCGCGAGT 263074
Query 46147 -----TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCA 46201
| |||| |||| |||| ||||| || || |||||| |||| || ||||
Sbjct 263073 CCACCTACGCCCAGCGACTGGTTGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGCG 263014
Query 46202 GTTTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCA 46261
|| ||| | || || | |||| | ||| ||||||| |||||||| || ||
Sbjct 263013 CATTCGCCTCTATTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCTCCA 262954
Query 46262 ACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACA 46321
||||||| || || || || ||||| ||||| || ||||| || |||||| || | |
Sbjct 262953 ACGAGCTCATTTCTCGTGATGAGGGTCTGCACACCGACTTCGCCTGTCTC--CTGTT-CT 262897
Query 46322 CTCGCGTGCACGACAAGCTTGCGCCCGA-CACCGTGCTGAG--CATGTTCAAGGAGGCGG 46378
||| | || | || | | | | | | || |||| || ||| ||| ||||| |
Sbjct 262896 CTCACCTG-AGGA--ACCGTCCAAGCAAGCAGCGTGTCCAGGACATCATCACCGAGGCTG 262840
Query 46379 TGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACG 46438
| ||||||||||||||||| || || | || ||||| ||||| || |||||||||
Sbjct 262839 TCGCCATTGAGAAGGAGTTCTTGACCGAGGCTCTGCCATGCGCCCTCCTCGGCATGAACT 262780
Query 46439 CACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACC 46498
| | ||| | |||||||||||||| || ||||| || || || || |
Sbjct 262779 CCAACCTCATGAAGCAGTACATCGAGTTTGTTGCCGACCGTCTCCTGGTCGCTCTGGGCA 262720
Query 46499 AGCCGAAGCATTTTCACG-CGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAG 46557
| |||| ||| || | || || || || || || ||| | |||||||| || |
Sbjct 262719 ACGAGAAG-GTTTACAAGTCGTCGAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGT 262661
Query 46558 GGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595
||||| || || || || || ||||| ||||| || ||
Sbjct 262660 GGCAAGACCAACTTCTTTGAGAAGCGTGTCGGTGACTA 262623
>seq512
Length=287951
Score = 141 bits (156), Expect = 9e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||| || || | ||| | ||| |||||||||||||||||||| |||
Sbjct 18411 CCGCCACGAAGACGGAGGACGAGATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAG 18470
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| ||||||||||| || |||| | ||||||||||| || |||
Sbjct 18471 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCAGGGGGG 18530
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | ||||||| ||||||||
Sbjct 18531 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCGGAGGACTCGACC 18590
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | ||| | ||| || || || || || || ||||| |||||||||
Sbjct 18591 TCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATG 18638
Score = 116 bits (128), Expect = 3e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|| || ||||| || |||||||| ||| | ||| ||| ||||| |||||||| ||
Sbjct 18213 GTAGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGCCCATCCTCGAGCTGCTTTCCA 18272
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
|| |||| | |||||||||||| || ||||| || || ||||| ||| || ||||
Sbjct 18273 GCAAAGATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 18332
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | || || | |||||||| |||| ||||| ||| || || || |||||
Sbjct 18333 ACATTGTCGATGGTGTCTGAGGACTCGACCTCGAGGGTAATGGTCTTGCCAGTCAGAGTC 18392
Query 131218 TTTACGAAAATCTGCAT 131234
|| ||||| ||||||||
Sbjct 18393 TTGACGAAGATCTGCAT 18409
>seq1
Length=1124325
Score = 134 bits (148), Expect = 1e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||||| ||||| || | || | ||| |||||||| || |||||||| |||
Sbjct 67694 CCACCGCGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 67635
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| ||||||||||| ||| |||| | |||||||||||| || ||
Sbjct 67634 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGA 67575
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| ||| || ||||| | || | || |||| ||||| |
Sbjct 67574 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 67515
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236
|| | ||| | || || || || || || || ||||| ||||||||||
Sbjct 67514 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATGA 67466
>seq24
Length=629884
Score = 87.8 bits (96), Expect = 2e-12
Identities = 128/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| ||| || |||||| ||||| ||||||||||| ||| |||
Sbjct 219420 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 219361
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| || ||||||||||| || || || || || ||||| ||| || ||||| | |
Sbjct 219360 TCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 219301
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || || | |||||| | || | ||| | || || || || || || || ||||
Sbjct 219300 CGATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGA 219241
Query 131225 A 131225
|
Sbjct 219240 A 219240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472006988342400
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