Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq486 140 2e-28 seq279 131 1e-25 >seq486 Length=11265 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 2489 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 2548 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 2549 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 2583 >seq279 Length=349471 Score = 131 bits (144), Expect = 1e-25 Identities = 204/292 (70%), Gaps = 0/292 (0%) Strand=Plus/Plus Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAAC 6254 ||| | ||||| |||||||| ||| |||| | | ||||||||||| ||||| ||| Sbjct 86214 GACCCCTTCTATCGCTACAAGATGGAGCGCCTTCAGACAAAGGTCGAGGGCAAGGGCAAC 86273 Query 6255 GGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCC 6314 ||||| || |||||||| |||||| || || ||| || | |||| ||||| | | Sbjct 86274 GGTATCAAGACCGTCATCGTCAACCTGAGCAGCGTTGCTCAGTCCCTCGCCCGCCCCGGC 86333 Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374 ||||| || || || || || | ||| |||||||| ||||| | | || | || Sbjct 86334 TCCTACTTGATCAAGTACTTTGGCTTCGAGCTTGGCGCCCAGACCAACATCGACCCTAAG 86393 Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434 | || || | ||| | ||||| | ||| | ||| ||||||| |||||| | ||||| Sbjct 86394 GATGATCGTTGGATCATCAACGGTGCCCATGAGTCTCCCAAGCTCCAGGACCTCCTTGAT 86453 Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCG 6486 ||||| || | ||| || ||||| | | ||| | ||||| ||||||| Sbjct 86454 GGCTTCATCAAGAGGTTCGTCCTGTGCCACAAGTGCAAGAACCCCGAGACCG 86505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334943179063535