Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq486 140 2e-28
seq279 131 1e-25
>seq486
Length=11265
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 2489 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 2548
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 2549 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 2583
>seq279
Length=349471
Score = 131 bits (144), Expect = 1e-25
Identities = 204/292 (70%), Gaps = 0/292 (0%)
Strand=Plus/Plus
Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAAC 6254
||| | ||||| |||||||| ||| |||| | | ||||||||||| ||||| |||
Sbjct 86214 GACCCCTTCTATCGCTACAAGATGGAGCGCCTTCAGACAAAGGTCGAGGGCAAGGGCAAC 86273
Query 6255 GGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCC 6314
||||| || |||||||| |||||| || || ||| || | |||| ||||| | |
Sbjct 86274 GGTATCAAGACCGTCATCGTCAACCTGAGCAGCGTTGCTCAGTCCCTCGCCCGCCCCGGC 86333
Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374
||||| || || || || || | ||| |||||||| ||||| | | || | ||
Sbjct 86334 TCCTACTTGATCAAGTACTTTGGCTTCGAGCTTGGCGCCCAGACCAACATCGACCCTAAG 86393
Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434
| || || | ||| | ||||| | ||| | ||| ||||||| |||||| | |||||
Sbjct 86394 GATGATCGTTGGATCATCAACGGTGCCCATGAGTCTCCCAAGCTCCAGGACCTCCTTGAT 86453
Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCG 6486
||||| || | ||| || ||||| | | ||| | ||||| |||||||
Sbjct 86454 GGCTTCATCAAGAGGTTCGTCCTGTGCCACAAGTGCAAGAACCCCGAGACCG 86505
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334943179063535
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |