Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq334 122 1e-22
seq279 122 1e-22
>seq334
Length=742376
Score = 122 bits (134), Expect = 1e-22
Identities = 357/544 (66%), Gaps = 7/544 (1%)
Strand=Plus/Plus
Query 61838 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 61897
|||| ||| | ||||| || ||||| |||| || | | || || || ||||||||
Sbjct 394280 TCCTGGTCGACAGTGAACTGGATGGGTGCGGCAGCTGCCTGGGTGCGGAGGTAGTACATG 394339
Query 61898 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACT 61956
|| || || |||||||| |||| ||| || ||||| || || | ||| || |
Sbjct 394340 CCAGTCTTGAGACCGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATTGAT 394399
Query 61957 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 62016
|| || || ||||| || | ||| ||| |||||| |||||||| || | ||| ||
Sbjct 394400 -GGCTCCCTCATGTGGATGTTTAGAGACTGAGATTGATCAATGAAGGCACCACGGTCAGC 394458
Query 62017 AGCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAAT 62076
|||||| | | ||| ||| | || | || ||||| | || || || | ||| ||
Sbjct 394459 AGCCATCTGCACAATGGTCCTCTGAGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGAT 394518
Query 62077 ATCTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTT 62133
||| | || | | | | | ||||||||||| ||| | || || || || | |||||
Sbjct 394519 ATCAGCCGGGATGCTAGGAATGTTCTGAATGGAACCATCCTCGGCGATGATACGGTTCTT 394578
Query 62134 GATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTAC 62193
|| | ||| ||| || ||| || | | | || ||||| || || || ||
Sbjct 394579 CATGGCCTCAGACCACAAGCCGAGCTCTGTCAGATCCCTGAGGAGCCAAGGGTTGACGAC 394638
Query 62194 TTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGA 62253
|| || || |||| | || | || ||| || || ||| || || || | |
Sbjct 394639 CTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAAAGCA 394698
Query 62254 CTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACT 62313
|||||| || |||| ||||| | || || ||||| ||||| ||||||| ||| || ||
Sbjct 394699 CTCATTGTTGCCCAGGATTTGCGACGTCGAAGCAGTGGGCATTGGTGCCAGCAACAAGCT 394758
Query 62314 ATTTCTAAGACC-GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCG 62372
|| | || ||| || | | |||| || || || || | ||||| | ||| || || |
Sbjct 394759 GTTGCGAACACCAGTCTCCT-TGATCTTCTCCTTCAGTGCATCCCAGTCCCAGAGGTCGG 394817
Query 62373 ACGG 62376
| ||
Sbjct 394818 AGGG 394821
>seq279
Length=349471
Score = 122 bits (134), Expect = 1e-22
Identities = 158/218 (72%), Gaps = 3/218 (1%)
Strand=Plus/Plus
Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711
|||| | ||| ||||| ||| ||| |||||||| || | | ||| | ||||||||
Sbjct 262899 AACAGGAGACAGGCGAAGTCGGTGTGCAGACCCTCATCACGAGAAATGAGCTCGTTGGAG 262958
Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771
|| || || || ||||| ||||||||||| || ||||| || || || || |||| |||
Sbjct 262959 AAGGTCAGGCCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATAGAGGCGAATGCGCCA 263018
Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CG 32828
||||| || || || || || || ||||||| |||| || | || || ||
Sbjct 263019 CTGAAGAAGATGCCCTCGACGGCAGCGAAGGCAACCAGTCGCTGGGCGTAGGTGGACTCG 263078
Query 32829 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 32866
| ||| || |||||||| ||||||| |||||||||||
Sbjct 263079 CGGTCCTGGATCCACTTGAGAGCCCAGTCGGCCTTCTT 263116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633624198406000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |