Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1 192 1e-43 seq512 176 8e-39 seq24 138 2e-27 seq967 107 4e-18 seq712 89.7 9e-13 >seq1 Length=1124325 Score = 192 bits (212), Expect = 1e-43 Identities = 181/231 (78%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||||| |||| ||| || |||||||| || |||||||| || |||||| Sbjct 67694 CCACCGCGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 67635 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || ||||| || ||| Sbjct 67634 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGA 67575 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| || ||||| | |||||| ||||||||||| | || || || Sbjct 67574 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 67515 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || | |||||| || || |||||||||||||| ||||| |||||||| ||| Sbjct 67514 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATGATG 67464 >seq512 Length=287951 Score = 176 bits (194), Expect = 8e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||| ||| ||||| || || || |||||||| || || || Sbjct 17955 CCACCACGGAGACGAAGCACCAGGTGCAGCGTCGATTCCTTCTGGATGTTGTAGTCAGAT 18014 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || |||| |||||||| |||||||| || ||||| ||||| | ||| ||||| |||||| Sbjct 18015 AGCGTCCGGCCATCTTCCAACTGCTTGCCAGCGAAAATGAGACGTTGCTGGTCTGGTGGA 18074 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| |||||||| | ||||||| || || ||||| | ||| || || Sbjct 18075 ATTCCCTCCTTGTCCTGAATCTTAGACTTGACGTTGTCAATCGTGTCCGATGACTCGACC 18134 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || ||||| | |||||||||||| |||||||| Sbjct 18135 TCAAGCGTGATCGTCTTGCCCGTCAAGGTCTTGACGAAAATCTGCAT 18181 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || || || || || |||||||| || |||||| Sbjct 18183 CCACCACGGAGGCGGAGAACCAGGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAG 18242 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||| || | |||||| || || || || || | || ||||| || || Sbjct 18243 AGGGTTCGCCCATCCTCGAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGG 18302 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | |||||| ||||||||||||| || || || Sbjct 18303 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCTGAGGACTCGACC 18362 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||| ||||| || || || || ||||||||||| |||||||| Sbjct 18363 TCGAGGGTAATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 18409 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | || || || ||||| ||||| ||||| || |||||| Sbjct 18411 CCGCCACGAAGACGGAGGACGAGATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAG 18470 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| ||||| || || || | || ||||| || || Sbjct 18471 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCAGGGGGG 18530 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| |||||||| || | || || || Sbjct 18531 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCGGAGGACTCGACC 18590 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || ||||||||||| ||||| |||||||| Sbjct 18591 TCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 18637 >seq24 Length=629884 Score = 138 bits (152), Expect = 2e-27 Identities = 138/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||||| || || | ||||| || | |||||| |||||||| || Sbjct 219418 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 219359 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 | || || ||||| || |||||||| |||||||| || ||||| | ||||||| ||| Sbjct 219358 AATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 219299 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| | || || || || | |||||| || || ||||| |||||||| ||||| Sbjct 219298 ATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAA 219240 >seq967 Length=190317 Score = 107 bits (118), Expect = 4e-18 Identities = 259/389 (67%), Gaps = 16/389 (4%) Strand=Plus/Minus Query 173086 CCTGAAGCAGGAAAAAATTGACACGATTATGCACTTTGCTGCGCAGACCCATGTGGACAA 173145 |||| || | | || || ||||| || | ||||| || |||||| | || |||||| Sbjct 79392 CCTGGAGAGGTACAACATCGACACCATCTTCCACTTCGCGGCGCAGTCGCACGTGGACCT 79333 Query 173146 CTCGTTCGGTAACTCGCTGGCATTTACCATGAACAACGTCTACGGGACCCACGTTCTCCT 173205 ||||| |||||| | || ||| | |||||| |||||||||||||| || || Sbjct 79332 GAGCTTCGGCAACTCGTACGGCTTCACCCACACCAACGTGTACGGGACCCACGTGCTGCT 79273 Query 173206 GGAATGCGCGAGGCTCTATGGCGGTGTCCAGCGGTTCATCAATGTGTCTACCGACGAAGT 173265 ||| |||| | | | | ||| ||| |||||||||| | | || || ||||| || Sbjct 79272 GGAGAGCGCCAAG---AAGGTCGGCATCCGGCGGTTCATCCACATCTCGACGGACGAGGT 79216 Query 173266 ATACGGCGAGAGCAGTCTGGGCAAAAAAGAAGGC---CTCGA--TGAACACTCGTCCCTC 173320 ||||||||| || || | | | || | | ||||| || || ||| Sbjct 79215 GTACGGCGAGGTCA---AGGACGACGACGACGACCTGCTCGAGTCGAGCA-----TCCTG 79164 Query 173321 GAGCCAACAAACCCATATGCAGCAGCCAAGGCTGGTGCCGAAATGATGGCACGTGCATAT 173380 | || || ||||| || || || ||||||| | ||||| ||| ||| | | || Sbjct 79163 GCCCCGACCAACCCCTACGCGGCGTCCAAGGCCGCCGCCGAGATGCTGGTGCACTCGTAC 79104 Query 173381 CACACATCGTACAAGCTACCAGTCATCGTGACGCGCGGCAACAATGTGTATGGCCCGCAT 173440 || | | |||||| || |||||| | |||| ||||||| || || |||||||| Sbjct 79103 CAGAAGAGCTTCAAGCTGCCCGTCATCATCGTGCGCAGCAACAACGTCTACGGCCCGCAC 79044 Query 173441 CAGTTCCCCGAAAAAATGATCCCAAAATT 173469 |||| ||| || || || ||||| || || Sbjct 79043 CAGTACCCGGAGAAGATCATCCCCAAGTT 79015 >seq712 Length=234997 Score = 89.7 bits (98), Expect = 9e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 275249 ACGTCCTGGACGACAGCGATTCCCCGGACGTCAAGGAGCTCTCCGGGTTCTTTGGGTTTC 275308 ||||| ||||||| | | ||||| |||| |||| | | | || |||||| Sbjct 124255 ACGTCATGGACGATGGAGCCAACCCGGTCGTCCGCCAGCTGGCAGAGCGCTATGGGTTCA 124314 Query 275309 AATATCTCGTGCGCGACAACCGGCCGCATATGAAGAAGGCCGGCAACCTCCGGTCCGCCT 275368 | || |||||| || ||||||||| |||||||||| || ||||| || | | | Sbjct 124315 ATTACACCGTGCGTGAAGACCGGCCGCGGCTGAAGAAGGCGGGTAACCTGCGATGGACGT 124374 Query 275369 TTACCAAGACAGACGGCGAATTCTTTGTCATCTTTGACGCCGACTTCTGCCCAAGGCCCG 275428 || | || |||||| ||||| | ||||||||||| ||||| |||||| | || | Sbjct 124375 TTGCTCGCACGAGCGGCGACTTCTTCGCTATCTTTGACGCTGACTTTTGCCCACGCCCGG 124434 Query 275429 ACTTCCTCGAGGAG 275442 |||||||| ||||| Sbjct 124435 ACTTCCTCAAGGAG 124448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921611052524200