Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq512 95.1 1e-14
seq1 82.4 6e-11
>seq512
Length=287951
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||||||||| || | | || | ||| | ||||| || |||||||||||||| |||
Sbjct 18408 ATACCGCCACGAAGACGGAGGACGAGATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCG 18467
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || || || || || || || || |||| || ||||| ||||| ||
Sbjct 18468 GAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCAGGG 18527
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| ||||| || ||||| ||||| || | | || | ||| |||| ||| |||
Sbjct 18528 GGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCGGAGGACTCG 18587
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 114384
|| || | ||| | || ||||| || || || || || || ||||||||||
Sbjct 18588 ACCTCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATGG 18639
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244
||| ||||| || || |||||||| || | || || |||||| | || || ||
Sbjct 17984 CGTCGATTCCTTCTGGATGTTGTAGTCAGATAGCGTCCGGCCATCTTCCAACTGCTTGCC 18043
Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304
|||| | |||||||| || ||||| || ||||| || || ||||| |||||| ||
Sbjct 18044 AGCGAAAATGAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTCCTGAATCTTAGACTT 18103
Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364
| | |||| ||||| | || ||||| || | || | ||| ||||| |||| ||
Sbjct 18104 GACGTTGTCAATCGTGTCCGATGACTCGACCTCAAGCGTGATCGTCTTGCCCGTCAAGGT 18163
Query 114365 TTTTACAAAAATCTGCAT 114382
|| || |||||||||||
Sbjct 18164 CTTGACGAAAATCTGCAT 18181
>seq1
Length=1124325
Score = 82.4 bits (90), Expect = 6e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || || || |||||||| ||| | || || || || || || || ||
Sbjct 67664 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 67605
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| |||| |||||||| ||||| || ||||||||||| ||||| ||||| ||
Sbjct 67604 GCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGACTTG 67545
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||||| || || || || | ||| | || ||||| || || ||
Sbjct 67544 ACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTC 67485
Query 114366 TTTACAAAAATCTGCATG 114383
|| || || |||||||||
Sbjct 67484 TTCACGAAGATCTGCATG 67467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420129356417820
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |