Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq512 95.1 1e-14 seq1 82.4 6e-11 >seq512 Length=287951 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| || | | || | ||| | ||||| || |||||||||||||| ||| Sbjct 18408 ATACCGCCACGAAGACGGAGGACGAGATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCG 18467 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || || || || || || || || |||| || ||||| ||||| || Sbjct 18468 GAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCAGGG 18527 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || | | || | ||| |||| ||| ||| Sbjct 18528 GGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCGGAGGACTCG 18587 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 114384 || || | ||| | || ||||| || || || || || || |||||||||| Sbjct 18588 ACCTCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATGG 18639 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 ||| ||||| || || |||||||| || | || || |||||| | || || || Sbjct 17984 CGTCGATTCCTTCTGGATGTTGTAGTCAGATAGCGTCCGGCCATCTTCCAACTGCTTGCC 18043 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 |||| | |||||||| || ||||| || ||||| || || ||||| |||||| || Sbjct 18044 AGCGAAAATGAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTCCTGAATCTTAGACTT 18103 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | |||| ||||| | || ||||| || | || | ||| ||||| |||| || Sbjct 18104 GACGTTGTCAATCGTGTCCGATGACTCGACCTCAAGCGTGATCGTCTTGCCCGTCAAGGT 18163 Query 114365 TTTTACAAAAATCTGCAT 114382 || || ||||||||||| Sbjct 18164 CTTGACGAAAATCTGCAT 18181 >seq1 Length=1124325 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| | || || || || || || || || Sbjct 67664 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 67605 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| |||||||| ||||| || ||||||||||| ||||| ||||| || Sbjct 67604 GCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGACTTG 67545 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||||| || || || || | ||| | || ||||| || || || Sbjct 67544 ACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTC 67485 Query 114366 TTTACAAAAATCTGCATG 114383 || || || ||||||||| Sbjct 67484 TTCACGAAGATCTGCATG 67467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420129356417820